Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2917 ATGGGTGAAGAAGAAATATTTGAGGATTCAAGAGCACCTTTGATTCAAGATCCTTTAAGAAGAACTGGTAATCTGCAGAAGGCAGTGGCACACATAATAACTGGTGTGATAGGAGCAGGAGTGCTATCTCTGGCATGGTCAGTGGGAGAATTAGGGTGGATTGGTGGTCCATTGATGATTTTGGTGTTTGCAATCACAACCTTTGTTTCTGTAGACCTTCTTTCTGACTGCTATAGATTTCCTCATCCTCAATATGGCAACATTAGGTGCCCCTCTCTCATGGATGCTGTTCATCTCTACCTAGGAGAGAGGAAGAAAAAGGTGTGTGGAGTGCTGGTACATGCAAGCTTATATGGTGCTACCCTTGCATATGTTATTACTTCTGCTACCAGTATCAGAGCGATACTGAAATCAAATTGTTATCACAAGGAAGGGCATGAGGCTCCTTGTAAATATGGGGATGCAGTATACATGATGTTGTTTGGACTGGTTCAGATCATAATGTCATTCATACCAGACCTCCATAACATGGCATGGGTTTCCATTGTTGCTGCCATAATGTCCTTTACATATTCATCTATTGGACTTGGACTTGGCATCACAACAGTAATAGAAAATGGAAGAATTATGGGTAGTTTAACAGGAGTACCAGCTGCAAATATTTCTGACAAGTTATGGTTAGTATTCCAAGCAATTGGTGACATTGCCTTTGCTTATCCATACTCAGTAATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATTATTGCTATCCTCATTACAACATTCTTCTATCTCTGTTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAAACTCCAGGGAACCTCTTGACAGGGTTTGGGTTTTATGAGCCTTATTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCACTTGGTGGGAGGATATCAGATTTACTGTCAGCCGATATATAGTGCTGTTGAAAGATGGTGTTCAAAAAAGTACCCGAACAGTGGCTTTGTGAATAATTTCTACCAACTGAGAGTGCCTTTGTTGCCAGATTTTCAGCTAAACTTGTTGAGGATATGTTTTAGAACAGCCTATGTGGTTTCCACAACTGGACTTGCGATCCTATTTCCTTACTTTAATCAAGTTCTGGGAGTGCTAGGAGCCTTAGGATTTTGGCCATTGGCTATATATTTCCCAGTAGAGATGTATTTTGTGCAGAGGAAAATTGAAGCTTGGTCTAGAAAATGGATTGTCTTAAGAACCTTCAGCTTTATTTGCTTTCTTGTGTCACTACTAGGTCTCATTGGATCACTTGAAGGAATCATAAGCGAGAAACTAAGCTAA 1377 0.4074 MGEEEIFEDSRAPLIQDPLRRTGNLQKAVAHIITGVIGAGVLSLAWSVGELGWIGGPLMILVFAITTFVSVDLLSDCYRFPHPQYGNIRCPSLMDAVHLYLGERKKKVCGVLVHASLYGATLAYVITSATSIRAILKSNCYHKEGHEAPCKYGDAVYMMLFGLVQIIMSFIPDLHNMAWVSIVAAIMSFTYSSIGLGLGITTVIENGRIMGSLTGVPAANISDKLWLVFQAIGDIAFAYPYSVILLEIQDTLESPPPENKTMKKASIIAILITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYCQPIYSAVERWCSKKYPNSGFVNNFYQLRVPLLPDFQLNLLRICFRTAYVVSTTGLAILFPYFNQVLGVLGALGFWPLAIYFPVEMYFVQRKIEAWSRKWIVLRTFSFICFLVSLLGLIGSLEGIISEKLS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2917 458 Pfam Transmembrane amino acid transporter protein 22 453 IPR013057 -
Pvu8g2917 458 PANTHER OS05G0424000 PROTEIN-RELATED 14 457 - -
Pvu8g2917 458 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 14 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2917 Pvu-Chr8 58850921 58860144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2917 4 455 Organic Solute Cotransporters AT1G58360 49.451 3.17e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2917 K24917 - gmx:100786621 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2917 8 58850921 58860144 Pvu8g2917 8 58850921 58860144 ECH
Pvu6g0643 6 17851354 17854206 Pvu8g2917 8 58850921 58860144 PCT
Pvu8g2917 8 58850921 58860144 Pvu6g0641 6 17815514 17819955 PCT