Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0643 ATGGATGTGAAAAACTCTTTGCCGATTGCTACAAGTGAACTTGTTGCTTATGATGAAGACGGCCATCTTAAAAGGAGTGGAACCTTATGGAGTGCTGTGGCTCACATCATAACTGCTGTTATTGGATCTGGTGTTCTATCTCTTGCATGGAGCACTGCCCAGTTGGGATGGATTGGAGGGCCAGTTGCATTGCTTTGTTTTGCAATCATCACCTATGTTTCTTCATCCCTCCTTTCTGATTGTTATAGAAACCCTGATCCTGTCACTGGGAAAAGAAACCACTCATACATGGATGCTGTTAGAATCAATCTTGGTAAAAGAAGGACATGGTTTGCTGGTTTCCTTCAAATTTTGACCTTGTATGGGACTAGTTGTGCTTATGTACTTACTACAGCAAACTGTTTAAGGGCAATTCTGAAAGCAAATTGTTATCACAAGGAAGGGCATCAAGCTCCTTGTACTTACGGGGGTGACATTTATATGGTGATGTTTGGAGCTGTTCAAGTTGTAATGTCATTCATACCAGACCTCCATAACATGTTATGGGTCTCGGTTTTGGCTGCAATCATGTCCTTTACATACTCTTTCATTGGACTAGGACTTGGTATGGCAAAAGTTATAGGAAATGGAAGATTTATGGGGAGCATAACAGGAATACCTGCTACTAACACTGCTAACAAGATGTGGTTAGTCTTCCAAGCACTTGGTGACATTGCTTTTGCTTATCCATATGCCTATCTCCTTCTTGAGATACAGGACACCCTGAAGTCTAGTCCACCAGAAAATCAAACCATGAAAAAGGCTTCCATGGTTGCAATCATCGTGACAACATTCTTCTACCTATCTTGTGGATGCTTTGGATATGGAGCTTTTGGAAATGATACACCAGGGAACATCTTGACAGGGTTTGGGTTTTATGAGCCTTATTGGCTTGTTGCCTTCGCTAATGCTTGCATTATTCTTCATTTGGTGGGAGGATATCAGATGTACAGTCAACCAATATATAATGCTGCTGATAGATGGTGCTCAAGAAAATTCCAAGATAGTCATTTTGCAAACAAGACTTATATAGTAAAATTGCCATTAATCCCTGGTTATGAGCTGAACCTTTTCAGGTTGTGTTTTAGAACAGTTTATGTGATTTCAACCACTGGGATTGCTATTTTGTTTCCTTACTTCAACCAAGTTCTGGGAGTTTTGGGAGCCATAAACTTCTGGCCATTGGCTATATATTTTCCAGTGGAAATCTACTTGCAACAGAGGCAAATTGGAGCTTGGACCAAACAATGGATTCTTCTTAGAATGTTCAGCTTTGTTTGCTTTCTTGTGACAGTTATGGGTCTAGTGGGATCAATTCAAGGAATCATTAGTCAGAAACTTTAG 1383 0.4035 MDVKNSLPIATSELVAYDEDGHLKRSGTLWSAVAHIITAVIGSGVLSLAWSTAQLGWIGGPVALLCFAIITYVSSSLLSDCYRNPDPVTGKRNHSYMDAVRINLGKRRTWFAGFLQILTLYGTSCAYVLTTANCLRAILKANCYHKEGHQAPCTYGGDIYMVMFGAVQVVMSFIPDLHNMLWVSVLAAIMSFTYSFIGLGLGMAKVIGNGRFMGSITGIPATNTANKMWLVFQALGDIAFAYPYAYLLLEIQDTLKSSPPENQTMKKASMVAIIVTTFFYLSCGCFGYGAFGNDTPGNILTGFGFYEPYWLVAFANACIILHLVGGYQMYSQPIYNAADRWCSRKFQDSHFANKTYIVKLPLIPGYELNLFRLCFRTVYVISTTGIAILFPYFNQVLGVLGAINFWPLAIYFPVEIYLQQRQIGAWTKQWILLRMFSFVCFLVTVMGLVGSIQGIISQKL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0643 460 PANTHER OS05G0424000 PROTEIN-RELATED 18 459 - -
Pvu6g0643 460 PANTHER AMINO ACID PERMEASE 7-RELATED 18 459 - -
Pvu6g0643 460 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0643 Pvu-Chr6 17851354 17854206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0643 18 443 Organic Solute Cotransporters AT1G77380 53.596 6.52e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0643 K24917 - gmx:100816934 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0643 6 17851354 17854206 Pvu6g0643 6 17851354 17854206 ECH
Pvu6g0643 6 17851354 17854206 Pvu8g2917 8 58850921 58860144 PCT