Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2887 ATGAGATCAGAGAGAAAGAGAATGAGAGAAGAGGGTGTGAGAGAAGATGTTCCTCTGTTTGAGACAAAGGAAGGAAGATTCAGAGGAGTGTACAGGGTTTTTGCATCAACAATATTTGCTGCTATCTGTTTGATCTGGTTTTACAGAGTGATGAACATGGAGAGAGTTGGAAGAGGAAGAAGATGGGCATGGATGAGTGTTATGGTGTCAGAGTTTGCGTTTGGATTCTACTGGATCATCACTCAGTCTGTTCGTTGGAGAATACTCTATCAAACACCTTCCAAACACAACCTCTCACACAGATATAAGGAGGAGAATTTACCAGCAGTAGACATTTTTGTATGCACGGCTGATCCAAAGCTGGAGCCTCCATGCATGGTGATGAACACGGTCTTATCAGCAATGGCATACAATTATCCTGCAAATAAACTGAATGTCTATCTCTCTGACGATGGAGGCTCTCAGTTAACCTTCTATGCTCTCTTAAAGGCCTCCATTTTCTCCAAACACTGGTTACCCTTTTGCAGAAGATTCAACGTTGAACCAAGGTCCCCAGAAGTCTTCTTTGCTCATCATGCTCAAAGTTGCAGCACTACCACTGAATATCACAAAGCATGCTTGCATATCAAGAAATTGTACGAAGAAATGAAAAGTGACATTGAATCAGCTGTGGGAAGGGGAGAGGTTCCAGAGAATGTGAGGAATGAGCACAGAGGATTCTCCGAATGGAATCCAAAAACCACAAAACAGGATCACCCCTCCATCGTGCAGATTATAATGGATGGAAGGGACATAAATGGTGTAGATGAAGATGGATATGAACTTCCAACACTGGTATACGTGGCACGCGAGAAACGACCCAATCATCCTCATCACTTCAAAGCTGGAGCTGTCAATGCACTGATAAGAGTATCATCAGAAATAAGCAACGCCCCTTTCATCCTCAACTTGGACTGCGACATGTACTCCAATAATGCAGATACAATTCAGGAAATACTGTGTTTTTTCCTCGATGAAACAAAAGGACAAGATATAGCTTATGTGCAGTTTCCACAAAGCTACAACAACATCACCAAAAATGATCACTATGGAAATTCTTATTTTGTAAGCTCTAAGTTTGAGTTAGCTGGCATATGCGGATATGGAGCAGCCTTGTTCTGTGGAACAGGATGCTTACATCGAAGAGAAAGTCTTTCAGGATCTTACCCAAGAGATTGCAGAGTAAAATGGGAGATCAAGCCTAGAAGAAACCATAACAGAACAATTGATGAAGTGAATGAAGCATCCAAAGCTTTAGCCACTTGCACCTATGAGGAGGGCACCCAATGGGGGAAGGAGATGGGATTAGTATATGGTATTGCTGTAGAAGACATTGCAACAGGCCTTGTAATCTCGTGCAGGGGTTGGAAATCCATTTATTACAACCCCGAAAGGAAGGCATTTGTGGGCATAGCTCCAACAACCTTGGATGTGAACTGTCTTCAACACATGAGGTGGTCGGAAGGCTTGTTCCAAGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCATGGGAAGATCCACTTGGGTGTGCAAATGGGATATTGCAATTACCTCTTGTGGGCTCCAATGTCTCTGCCCACTCTTTGTTATGCCATTGTTCTTCCAATTTCCTTGTTTCATGGCATTCCATTGTTCCCAAAGCTTTCAAGCATGTGGGTCCTTCCATTTGAGTATGCTTTTCTTGCTACCTATGGCTATAGCTTGTGTGAGTATTTGAGCTGTGGATCCACGACAAGAGGTTGGTGGAATTTGCAAAGAATAAAGTTCATCCACAGAATCACCTCTTATCTCTTTGGCTTCATCGATACCATGAGCAAGCAAATAGGGTTGTCACAGACAAAGTTTGTGATCACAGATAAAGTGGTAACTGACGATGTTCGAAAGAGATACGAGGAAGAAATAATTGATTTTGGAGGCTCCTCGATCATGTTGACCATATTAGCAACAGTGGCTATGCTAAACCTTTTTGGAGTGGTTGGAGGAATGAAGAGGGTTCTCATGGAATTGGAATTCGGGTGGAGCCAATTGATGGTGCAGATTACACTGAGTTTGTTGGTGGTGATGATCAATTTACCAGTATATGAAGCACTTTTCATTCGTAGTGATAAAGGCAGAATATCATCCTCGATTATGCTGAAGTCCATTATCGTGGCTTCATTAGCATGTTACCTAGCATCTTTCATTTCCTAG 2235 0.4237 MRSERKRMREEGVREDVPLFETKEGRFRGVYRVFASTIFAAICLIWFYRVMNMERVGRGRRWAWMSVMVSEFAFGFYWIITQSVRWRILYQTPSKHNLSHRYKEENLPAVDIFVCTADPKLEPPCMVMNTVLSAMAYNYPANKLNVYLSDDGGSQLTFYALLKASIFSKHWLPFCRRFNVEPRSPEVFFAHHAQSCSTTTEYHKACLHIKKLYEEMKSDIESAVGRGEVPENVRNEHRGFSEWNPKTTKQDHPSIVQIIMDGRDINGVDEDGYELPTLVYVAREKRPNHPHHFKAGAVNALIRVSSEISNAPFILNLDCDMYSNNADTIQEILCFFLDETKGQDIAYVQFPQSYNNITKNDHYGNSYFVSSKFELAGICGYGAALFCGTGCLHRRESLSGSYPRDCRVKWEIKPRRNHNRTIDEVNEASKALATCTYEEGTQWGKEMGLVYGIAVEDIATGLVISCRGWKSIYYNPERKAFVGIAPTTLDVNCLQHMRWSEGLFQVFFSKYCPFIYGHGKIHLGVQMGYCNYLLWAPMSLPTLCYAIVLPISLFHGIPLFPKLSSMWVLPFEYAFLATYGYSLCEYLSCGSTTRGWWNLQRIKFIHRITSYLFGFIDTMSKQIGLSQTKFVITDKVVTDDVRKRYEEEIIDFGGSSIMLTILATVAMLNLFGVVGGMKRVLMELEFGWSQLMVQITLSLLVVMINLPVYEALFIRSDKGRISSSIMLKSIIVASLACYLASFIS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2887 744 Pfam Cellulose synthase 424 739 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu8g2887 744 Pfam Cellulose synthase 110 405 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu8g2887 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 125 510 IPR029044 -
Pvu8g2887 744 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 12 738 - -
Pvu8g2887 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 246 406 IPR029044 -
Pvu8g2887 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 98 196 IPR029044 -
Pvu8g2887 744 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 12 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2887 Pvu-Chr8 58661256 58665799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2887 1 743 Glycosyltransferase AT1G55850 46.338 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2887 - - gmx:100816849 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2887 8 58661256 58665799 Pvu8g2887 8 58661256 58665799 ECH
Pvu6g0615 6 17541645 17546172 Pvu8g2887 8 58661256 58665799 PCT