Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0615 ATGGAAATCATTGAGCAAACTCCACTGTTTGATACAAAAAAGGGCAGAGGAAGACTCCTCTACAGGTCCTTTGCAGTTTCATTATCTGTGTGCATATGCTTCATATGGATTTACAGATTTAGCCATATAATAGATTCAAAGGGTGAAGATGGCAAATGGGCATGGCTTGGTATGCTTGGTGCTGAATTGTGGTTTGGCTTTTACTGGCTTCTCACTCAGGCCTTCAGATGGAACCTTGTGTTCAGACAACCATTCAGAAACAGACTCACTCAGAGATATGAGAAAAAGTTGCCAGGAGTGGACATATTTGTGTGCACAGCAGACCCTGATATTGAGCCACCAATGATGGTGATTAATACAGTGCTATCTGTTATGTCTTATGACTATCCAACTGAGAAATTGAATGTGTATCTCTCTGATGATGCTGGATCTCAAATCACGTTCTATGCTCTATTGGAAGCATCAAACTTTGCAAAATATTGGATTCCATTTAGCAAAAGATTCAAAGTGGAGCCAAGGTCACCTGCTGCATATTTTAAGAGTATAGACTCATCAGGTTACTCTAGTGATTCTGATCAAGTCAAAGAGCTAACAACTATCAAGAAATTGTACCACGAAATGAAAAGACATATTGAAGATGCAACCAAGTTTGGTGAAGTACCCAAAGAAGTACGTCTAAAGCACAAGGGATTTTCTCAGTGGGATTCATATTCTTCTCGACGTGATCATGGCACAATTCTTGAAATACTGGTTCATAAAAGGGATCCTGAGAATTCAAAAGATGTAGATGGATTCCTTTTACCAACTCTAGTGTATTTGGCTCGCGAGAAGAGACCCCAATACTTCCACAACTTCAAAGCTGGAGCTATGAATTCATTGTTAAGGGTGTCTTCGAATATCAGTAATGGGAAAATCGTTCTAAATGTAGACTGTGACATGTACTCAAACCATTCACAGTCTGTGAGAGACGCTCTCTGCTTTTTCATGGATGAAGAAAAAGGTCACAAAATTGCTTATGTGCAGTTCCCTCAGATTTTTGAGAATGTCACTAAGAATGATTTATATGGGAGTAGTCTACTAGCAATATCTGAGGTGGAGTTCCCTGGTGCAGACGGTTGTGGTGGTCCTTTGTATATAGGAAGTGGCTGCTTTCACAAGAGAGAGTCTCTTTGTGGATTGAAGTTCAGTGATCAATATAGGAATGACTGGAATACCAGTGAAGATTATCAGTTTAAAGAAGCAAGCCTGAAGGAACTGGAAGAAGAATCAAAGGCTCTTGCAAGTTGCACCTATGAGGAAAATACACTATGGGGAAAAGAGATGGGTTTAAGGTATGGGTGTCCAGTAGAGGATGTGATAACAGGATTGGCTATTCAGTGCCAAGGATGGAAATCAGTGTACTATAATCCACCAAGGAAGGCTTTCTTAGGTTTAGCTCCAACAACCTTGCCTCAAACACTTGTTCAACACAAGAGATGGTCTGAAGGAGACTTGCAAATTTTGCTTTCTAAGTATAGCCCTGCATGGTATGGTTTTGGAAGGATTAGTTTGGCACAACAAATGGGATATAGTGTTTATTGCTTATGGGCACCTAACTGTTTTGCAACACTATATTATTCTATCATCCCTTCATTGTACCTCCTTAAAGGCATTCCCTTGTTTCCAAAGATGTCAAGTCCATGGTTCATACCTTTTGCATATATCATTGTTGGGGAAGGCACCTATAGTTTGTTGGAGTTTTTCTTCTGTGGGGGCACATTCCAAGGTTGGTGGAATGACCAACGGATATGGCTGTACAAGAGAACAAGCTCTTACTTATTTGCCTGCATTGACACCATCTTGAAGCATTTTGGATTCTCAGATTCAACTTTTATAATCACAACTAAGGTTACTGAAGAAGAAGCTTCCAAACGCCATGAGAAGGAAATAATGGAGTTTGGAACCTCCTCTCCAATGCTCACTTTATTAGCAACTTTTGCATTGCTCAATTTGTTCTGTTTTCTGAGTGTGTTGAAGGATGCAGCCCTAAGGGAAGGTGGCTTTGAAATTTGTGAGACAATGGCCTTGCAATTTCTATTGTGTGGATTTTTGGTTATCATCAATTTACCTATATACCAAGGACTTTTCTTAAGGAAGGACAATGGAAGATTGCCTGGTTCTGTTGCCATCAAATCAATATTACTAGCACTATGTGTATTCATCTCCTTTAGCCTCTATTTGGATTGGGAGGGGGGGATTTGTGGGTACAGGACAAAGTAG 2259 0.4011 MEIIEQTPLFDTKKGRGRLLYRSFAVSLSVCICFIWIYRFSHIIDSKGEDGKWAWLGMLGAELWFGFYWLLTQAFRWNLVFRQPFRNRLTQRYEKKLPGVDIFVCTADPDIEPPMMVINTVLSVMSYDYPTEKLNVYLSDDAGSQITFYALLEASNFAKYWIPFSKRFKVEPRSPAAYFKSIDSSGYSSDSDQVKELTTIKKLYHEMKRHIEDATKFGEVPKEVRLKHKGFSQWDSYSSRRDHGTILEILVHKRDPENSKDVDGFLLPTLVYLAREKRPQYFHNFKAGAMNSLLRVSSNISNGKIVLNVDCDMYSNHSQSVRDALCFFMDEEKGHKIAYVQFPQIFENVTKNDLYGSSLLAISEVEFPGADGCGGPLYIGSGCFHKRESLCGLKFSDQYRNDWNTSEDYQFKEASLKELEEESKALASCTYEENTLWGKEMGLRYGCPVEDVITGLAIQCQGWKSVYYNPPRKAFLGLAPTTLPQTLVQHKRWSEGDLQILLSKYSPAWYGFGRISLAQQMGYSVYCLWAPNCFATLYYSIIPSLYLLKGIPLFPKMSSPWFIPFAYIIVGEGTYSLLEFFFCGGTFQGWWNDQRIWLYKRTSSYLFACIDTILKHFGFSDSTFIITTKVTEEEASKRHEKEIMEFGTSSPMLTLLATFALLNLFCFLSVLKDAALREGGFEICETMALQFLLCGFLVIINLPIYQGLFLRKDNGRLPGSVAIKSILLALCVFISFSLYLDWEGGICGYRTK* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0615 752 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 589 IPR029044 -
Pvu6g0615 752 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 174 IPR029044 -
Pvu6g0615 752 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 245 412 IPR029044 -
Pvu6g0615 752 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 734 - -
Pvu6g0615 752 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 6 734 - -
Pvu6g0615 752 Pfam Cellulose synthase 100 400 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu6g0615 752 Pfam Cellulose synthase 418 733 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0615 Pvu-Chr6 17541645 17546172 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0615 8 736 Glycosyltransferase AT1G55850 56.267 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0615 - - pvu:PHAVU_006G058700g 1520.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0615 6 17541645 17546172 Pvu6g0615 6 17541645 17546172 ECH
Pvu6g0615 6 17541645 17546172 Pvu8g2887 8 58661256 58665799 PCT