Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2886 ATGGGGAGTGGTGAAGAGAACTCATTGTTTGAAACAAGGAAAGACAAAGCAAGGCACATTCGGAGGCTCTATGCTGTCTCTTTGTCTGTGGCCATATGCTTCGTCTGGGCATTCAGACTCACTCACATACCTGCAAAAGGAGAAGCTGGGAAATGGGCTTGGCTTGGTTTGTTTGTTGCAGAAGTGTGGGGTGGCATCTATTGGATCTTTTATCAAGCCCTTCGATGGAACATGGTCTACAGAACAACCTTCCCCAACAGACTCACTCCAAGATATGAGAGTAGGTTCCCGGGAGTGGACATCTTTGTGTTTACGGCAGATGCAGTGGTGGAGCCACCGATGATGGTGATCAATACAGTGTTATCTGTGATGGCTTATGACTATCCAGCTGAGAAGTTGAGCGTGTATCTCTCAGATGATGGAGGCTCAGATGTAACCTTTTATGCTCTTTTACAAGCTTCTTCCTTTGCCAAGCATTGGATTCCATTCTGCAAGAGATTTAAGGTGGAACCAAGATCACCTGCTGCCTATTTTAACACTGTTGCTTCAACAAAATCAGAGGACCATAACTATGTCAAACACTTGGCAACCATCCATAAATTATACGAAGAAATGAAAAGGAGAGTAGAAGAAGCAACAAAGTTGGGTGTACCCAGTGAAGCACGGTCAAAGCATAAGGGTTTTTCCCAATGGGATTCGTATTCCTCTCCACGTGATCACGATACTATCCTTCAAATTTTGATGCATAAAAAGGAGTCAGAAGGGTCAAAGGACGTAGATGGGTGTACTTTGCCAACCTTAGTGTATATGGCTCGTGAAAAGAGACCTCACTATCACACCAACTTCAAAGCTGGAGCTATAAATGCATTGTTAAGAGTGTCTTCAACGATTAGTAATGGGAAAATCATTCTATTTCTGGATTGTGACATGTACTCCACCCATTCAAAATCAGTGAAAGATGCTCTGTGTTTTTTCATGGATGAAGATAAAGGTCAAGAAATTGCTTACGTGCAATTTCCACAATGTTTTCATAATATTGGAAAGAATGATCTTTACGCGAATGCTATATCAGATATTGTGCAGGTAGAACTCCATGGTTTTGATGGTTTTGGTGGCCCACTTTTTATTGGAACTTGTTGCTATCTTAGAAGAGATGCTCTCTGGTGGAAGAAGTTTAGTCGTGAATACAAAAATGATTGGAATGATCAGAATGAGAATGAGGTGACTGAAGTAAACTTGCATGAACTCGAAGAAGAATCGAAAGCTTTAGCAAATTGCAGTTATGAGAAAAATACCTTATGGGGAAAAAAAATTGGTTCAATATATGGCTGTCTTGTGGAAGATGTGATAACAGGGTTGCAGATGCATGCACATGGATGGAAATCAGTATACTACAACCCATCAATAAGTGCTTTTTCTGGTGTTGCTCCAACTAGCTTACTTCACACACTAGTTCAACTAAAGAGATGGGGTGAAGGTCATATGCAACTTACACTTTCTAAGTTCAGACCTAAATGGTATGGTGATCAAAAGATCAACATATGCCTACTATTGGGATATTGGCACCACAACTTCTTTGCCATCACTTCCTTGTCAGTATTATATTACTCCATCATCCCTTCACTTTATATCCTTAAGGGTGTTTCCCTCTTTCCAAAGATTTCTAGCTTATGGTGTATACCTTTCATATGTGTAACTGTTGGGGAAATTGCTTATAGTTTGATTGAGGGTTTGAGTATGGGAGGATCAATCCAAGGTTGGTGGAATGGTACAAGAATGTGGTTGTACGTGAAAACAAGTTCCTTTCTTTTTTCCTTAATAGACGGCATCCTAGGATTCTTTGGACATCCAAATTCATCATATTCACTCACATCAAAGGTCATTGATGATGATGTTGCTCAACGTTACAAGAAAGAGGTCATGGAATTTGGAACATCTTCTCCTTATTTCACTGTTCTAGCAACACTTGCATTACTCAATTTGTTTTGCTTGCTTCTAACTTTAAAGGATTTGGTCCTTCAAAAAGGTACCTTTGCTGCTGAGAAAATGACATTACAAGTTCTTTTGTGTGGAGTTTTAGTTGTCATCAATATTCCCTTATACCAAGCCATTTTTGTGAGGAAGGATAAGGGTAGAATGCCAACTTCTGTTTCTATCAAGTCTACTGCAGTGGCTTTCACTGCATGTGTGTTCTTCAAACTATTCAATTGA 2211 0.3994 MGSGEENSLFETRKDKARHIRRLYAVSLSVAICFVWAFRLTHIPAKGEAGKWAWLGLFVAEVWGGIYWIFYQALRWNMVYRTTFPNRLTPRYESRFPGVDIFVFTADAVVEPPMMVINTVLSVMAYDYPAEKLSVYLSDDGGSDVTFYALLQASSFAKHWIPFCKRFKVEPRSPAAYFNTVASTKSEDHNYVKHLATIHKLYEEMKRRVEEATKLGVPSEARSKHKGFSQWDSYSSPRDHDTILQILMHKKESEGSKDVDGCTLPTLVYMAREKRPHYHTNFKAGAINALLRVSSTISNGKIILFLDCDMYSTHSKSVKDALCFFMDEDKGQEIAYVQFPQCFHNIGKNDLYANAISDIVQVELHGFDGFGGPLFIGTCCYLRRDALWWKKFSREYKNDWNDQNENEVTEVNLHELEEESKALANCSYEKNTLWGKKIGSIYGCLVEDVITGLQMHAHGWKSVYYNPSISAFSGVAPTSLLHTLVQLKRWGEGHMQLTLSKFRPKWYGDQKINICLLLGYWHHNFFAITSLSVLYYSIIPSLYILKGVSLFPKISSLWCIPFICVTVGEIAYSLIEGLSMGGSIQGWWNGTRMWLYVKTSSFLFSLIDGILGFFGHPNSSYSLTSKVIDDDVAQRYKKEVMEFGTSSPYFTVLATLALLNLFCLLLTLKDLVLQKGTFAAEKMTLQVLLCGVLVVINIPLYQAIFVRKDKGRMPTSVSIKSTAVAFTACVFFKLFN* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2886 736 Coils Coil 195 215 - -
Pvu8g2886 736 SUPERFAMILY Nucleotide-diphospho-sugar transferases 114 547 IPR029044 -
Pvu8g2886 736 Pfam Cellulose synthase 416 731 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu8g2886 736 Pfam Cellulose synthase 99 389 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu8g2886 736 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 192 IPR029044 -
Pvu8g2886 736 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 397 IPR029044 -
Pvu8g2886 736 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 731 - -
Pvu8g2886 736 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 7 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2886 Pvu-Chr8 58648606 58658816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2886 9 729 Glycosyltransferase AT1G55850 51.169 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2886 - - pvu:PHAVU_L008300g 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0614 6 17537711 17538569 Pvu8g2886 8 58648606 58658816 PCT
Pvu8g2886 8 58648606 58658816 Pvu6g0613 6 17528967 17531874 PCT