Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0613 AAATTGTACCAAGATATGGAAAGTAGAATAGAAAATGCAGCCAATATGGGTAGAGTCCCAGAAGAAGTACACTCAAAGCATAAAGGGTTTTCTCAGTGGGATTCATACTCTTCTCGAACAGACCATGACACAATTCTTCAAATATTACTTGATGGAAAGGACTCGAGTGCCAAAGATGTAGATGGGAATGTTATGCCCATATTAGTATATTTGGCTCGTGAGAAGAGACCTCATGTCGCACATAACTTCAAAGCTGGAGCCATGAATTCGTTGATAAGAGTGTCATCAATGATTAGCAATGGGGATATTATCCTTAATGTAGATTGTGACATGTACTCAAACAATTCTCAATCTCTAAGGGATGCACTTTGCTTCTTCATGGATGAAGATAAGGGCCATGAAATTGCTTTTGTGCAGACTCCACAGTGTTTTGAGAATATCACGAAGAATGATCTATATGCTGGTTCTCTACGAGTAATTTTTGAGATGGATTTCCATGGTATGGATTCACTTGGTGGGCCTTTGTATATTGGAACTGGTTGCTTTCACAGAAGAGAGATACTGTGTGGAAGAAAGTTCAATGACCAAATCAAGAAAGAAGCAAGCTTGCATGAACTGGAAGAAAAATCAAAGGCTCTTGCTAGTTGTACCTTTGAGAAAAACACTTTATGGGGAAAAGAGATGGGACTGCAATATGGTTGTTCACTGGAGGATGTTATGACAGGATTGTCTATTAAATGCAAAGGATGGAAATCAGTGTACTATAATCCTCAAAGGAAAGCTTTCTTAGGTGTAGCTCCAAACACTCTGCCACAAGCACTAGTTCAACATAAGAGATGGTCTGAAGGATGCTTTCAAATTTTTCTTTCTAAGCATAGTCCTGCTTGGTATGCTTATGGATTCATCAGTCCAGGCCTCCAAATGGCATATTGTTACTATAACCTATGGGTGTTTCTTTCCTGGCCAACTCTATATTACTGCATTATCCCTTCACTCTATCTTCTCAAAGGCATTCCCTTGTTTCCTCAGATGTCAAGTCCATGGTTCATCCCTTTTGCATATGTGATGCTTGGCGATTCCTCTTACTGCCTGATGGAGTTTTTGTGGTCAGGAGGCACAGTAAAGGGTTGGTGGAATGACCTACGGTTATGCCTATACAAGAGAACAACCTCTTATCTCTTTGCTTTTGTTGATACCATCTTCAAGTTTTTTGGGTTTTCAGAATCAACCTTTATAGTATCTGCAAAGGTAGCTGAAGAAAAAGTTTCCCAACGATATGAGAAAGAAATCATGGAGTTTGGAAACTCATCCCCAATGCTCACTTTGCTAGCAACACTTGCATTGCTCAATTTGTTTTGCCTTCTTGGCATGCTCCTAAAGCAAGTGTTCATCAATCAAGAGGGTCTCAGAATTTTTTATACAATGACATTGCAAGTTCTACTAAGTGGGGTTTTGGTTCTGATCAATGTACCTGTGTACCAAGGACTCTTCCTAAGAAAAGACAAGGGAAGATTACCAATATCTGTTGCAGCTAAATCCACAGCATTAGCTCTATCTGCATGTTTCCTCTTTATTTCTACAAGTTAA 1587 0.3938 KLYQDMESRIENAANMGRVPEEVHSKHKGFSQWDSYSSRTDHDTILQILLDGKDSSAKDVDGNVMPILVYLAREKRPHVAHNFKAGAMNSLIRVSSMISNGDIILNVDCDMYSNNSQSLRDALCFFMDEDKGHEIAFVQTPQCFENITKNDLYAGSLRVIFEMDFHGMDSLGGPLYIGTGCFHRREILCGRKFNDQIKKEASLHELEEKSKALASCTFEKNTLWGKEMGLQYGCSLEDVMTGLSIKCKGWKSVYYNPQRKAFLGVAPNTLPQALVQHKRWSEGCFQIFLSKHSPAWYAYGFISPGLQMAYCYYNLWVFLSWPTLYYCIIPSLYLLKGIPLFPQMSSPWFIPFAYVMLGDSSYCLMEFLWSGGTVKGWWNDLRLCLYKRTTSYLFAFVDTIFKFFGFSESTFIVSAKVAEEKVSQRYEKEIMEFGNSSPMLTLLATLALLNLFCLLGMLLKQVFINQEGLRIFYTMTLQVLLSGVLVLINVPVYQGLFLRKDKGRLPISVAAKSTALALSACFLFISTS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0613 528 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 38 260 IPR029044 -
Pvu6g0613 528 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 525 - -
Pvu6g0613 528 Pfam Cellulose synthase 3 197 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu6g0613 528 Pfam Cellulose synthase 204 525 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu6g0613 528 SUPERFAMILY Nucleotide-diphospho-sugar transferases 68 333 IPR029044 -
Pvu6g0613 528 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0613 Pvu-Chr6 17528967 17531874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0613 1 521 Glycosyltransferase AT1G55850 57.224 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0613 - - pvu:PHAVU_006G0586001 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2886 8 58648606 58658816 Pvu6g0613 6 17528967 17531874 PCT