Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2884 ATGGACTTCAATATGAGTCTTGACACCATCTTTCATTCTAGATTTTCTCCTCTTTTTCCTCGTTCCTTTCTTTTCTCCGGAAAATCGATCATCATCGTATTCATGTCGGACGAAGGTCGACCATTACCAAAGTTTGGTGAATGGGACGTTAACGATCCTTCTTCTGCTGAAAGCTACACAGTCATTTTCAACAAAGCAAGAGATGATAAAAAGACAGGTGGCAAACCAGATTCACCTTCTAAGAGAAATCATCGTACCAGACATCAGTTAGATCCTGCTAGAACACAACAACAAAAAAAATGGTTTTGTTGCATGCATAGTCCTCAAGCAGAGTCATAG 339 0.3982 MDFNMSLDTIFHSRFSPLFPRSFLFSGKSIIIVFMSDEGRPLPKFGEWDVNDPSSAESYTVIFNKARDDKKTGGKPDSPSKRNHRTRHQLDPARTQQQKKWFCCMHSPQAES* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2884 112 MobiDBLite consensus disorder prediction 65 94 - -
Pvu8g2884 112 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 37 72 IPR008700 -
Pvu8g2884 112 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED 35 98 - -
Pvu8g2884 112 MobiDBLite consensus disorder prediction 65 100 - -
Pvu8g2884 112 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 35 98 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2884 Pvu-Chr8 58636727 58638886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2884 - - pvu:PHAVU_008G279500g 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2884 8 58636727 58638886 Pvu8g2884 8 58636727 58638886 ECH
Pvu6g0608 6 17502174 17505359 Pvu8g2884 8 58636727 58638886 PCT