Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0608 ATGTCGGAAAAGGGTCGGCCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCAGCCTCGGCTGAGGGGTTCACAGTGATATTTAATAAGGCCAGGGATGAAAAAAAGACAGGTGGCAATCCTGAGTCACCAGCAAAGACTGCCGCTGATCCTCATAGCAAACCTGCAGTAGATCCCGGCAAAACTCAGACTAAAAAATGGTTTTGCTGCATGCAACCTTCTGCGGAATGA 234 0.4744 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPAKTAADPHSKPAVDPGKTQTKKWFCCMQPSAE* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0608 77 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 76 IPR040387 -
Pvu6g0608 77 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Pvu6g0608 77 MobiDBLite consensus disorder prediction 30 66 - -
Pvu6g0608 77 PANTHER RPM1-INTERACTING PROTEIN 4-LIKE 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0608 Pvu-Chr6 17502174 17505359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0608 - - gmx:100305826 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0608 6 17502174 17505359 Pvu6g0608 6 17502174 17505359 ECH
Pvu6g0608 6 17502174 17505359 Pvu8g2884 8 58636727 58638886 PCT