Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2867 ATGATGAGATGGTACTCCCTTCTGACTTCAACTCCAAAACAAGTGTCTCTCCTCTTTGTTAGCCACTTCCACTCCACTTTTGTCACTCCATCACCAAAACAAGTGTCCCAAATCCACCATCGTTGGTGGGGCTACCCCAAACCCAGTTTCACCCCCTCCTCACCCTCTTGCAGACAAAGGGTCAACACCTTGCACACTGGTTCCTCTGTAGAACAAATTCAAGTTCATGAAGTTGTTGAGCACGATGTTTGGATGAAGATGCAGGATGAAGCTAGATTTGATGCCACTGAGGAACCCATCTTGTCTAGTTACTACAACTCTTCCATTCTCTCTCACAAATCACTGGAAACCGCTTTGGCCAATCACCTTGCAGTCAAACTCAGCAGTGCATCACTTCCTAGCAGTGCCCTTTCTGATCTTTTTGTCAGGGTTTTGGAAACTGATCAAGCCATCATGGATGCTGTGAAGAGTGATCTGAGGGCAGTGAAGGAGAGAGACCCCGCATGCATAAGCCACGTGCACTGCTTCTTGAATTTCAAAGGCTTTCTGGCATGCCAAGCTCACAGGGTGGCTCACAAACTGTGGCTTCAGAGAAGGAAGATTCTAGCTGTCATGATTCAGAACCGGGTTTCTGAGGTTTTTGCGGTGGATATTCATCCGGGGGCTAAGATTGGAAGTGGGATTTTGCTGGATCATGCAACTGGGATTGTGGTGGGAGAGACGGCTGTGATAGGGAACAATGTGTCAATTCTGCATAGTGTGACATTGGGAGGAACTGGTAAGGTTTCTGGTGATAGGCACCCAAAAATTGGTGATGGGGTGCTGATAGGTGCTGGAACATGTATTTTGGGGAATATTAAGGTCGGTGAAGGGGCTAAGATTGGTGCTGGTTCAGTGGTCATCAAGGATGTGCCTCCAAGGACTACAGTTGTTGGTAACCCTGCTAAGCTGGTTGGAGGAAAGAACAACCCTGTTAAGTTGGATAAGATTCCTAGCTTCACCATGGACCATACTTCACATATTTCTGACTTTTATGACTATTGTGTTTAG 1050 0.4676 MMRWYSLLTSTPKQVSLLFVSHFHSTFVTPSPKQVSQIHHRWWGYPKPSFTPSSPSCRQRVNTLHTGSSVEQIQVHEVVEHDVWMKMQDEARFDATEEPILSSYYNSSILSHKSLETALANHLAVKLSSASLPSSALSDLFVRVLETDQAIMDAVKSDLRAVKERDPACISHVHCFLNFKGFLACQAHRVAHKLWLQRRKILAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGIVVGETAVIGNNVSILHSVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGEGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNNPVKLDKIPSFTMDHTSHISDFYDYCV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2867 349 Pfam Bacterial transferase hexapeptide (six repeats) 267 301 IPR001451 -
Pvu8g2867 349 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 276 304 IPR018357 GO:0016740
Pvu8g2867 349 Pfam Serine acetyltransferase, N-terminal 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu8g2867 349 Gene3D serine acetyltransferase, domain 1 65 216 IPR042122 -
Pvu8g2867 349 Gene3D Hexapeptide repeat proteins 217 337 - -
Pvu8g2867 349 PANTHER SERINE O-ACETYLTRANSFERASE-RELATED 60 349 - -
Pvu8g2867 349 TIGRFAM cysE: serine O-acetyltransferase 155 316 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pvu8g2867 349 SMART SATase_N_2_a 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu8g2867 349 PANTHER SERINE ACETYLTRANSFERASE 60 349 - -
Pvu8g2867 349 SUPERFAMILY Trimeric LpxA-like enzymes 84 319 IPR011004 -
Pvu8g2867 349 CDD LbH_SAT 214 314 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2867 Pvu-Chr8 58552708 58553757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2867 83 345 Miscellaneous Gene Families AT2G17640 52.045 8.66e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2867 K00640 - gmx:100820316 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2867 8 58552708 58553757 Pvu8g2867 8 58552708 58553757 ECH
Pvu6g0578 6 17130900 17133097 Pvu8g2867 8 58552708 58553757 PCT