Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0578 ATGAATGTTCTGGTTCTAGGGCGCTTTTTCACTTCTCCATTATATAAGACTTCGCCTCTCACTCCCTCCTCAATCCAATTCACACCCATTTTCATTCATCCCTCAAAGCTCCAACCTTTGCACGCAATCCACCTCTTCTCTCTCTCCATGGCCACTTGCGTTGACGCCACAACCCCTCTTTCTCGCAAGCCAAACGTGCCCCAATCCGATGACCATTCTTTCAATTACACCAAATTCTGCCGACCCAATTTTTCCGATCGCCTCCCCTGCATACCCATTTGCAAGAATCGGGAGATGGCCTTCTCGCGTGTGGAGGACCTGGACACGCGTGTAGAGGACTTGGACACGCGTGCGGAGGATGGTCTTGGTGTTCTTGAGTTCGGGGCTGTTGATCTTTGGTTGAAGATTCAAGAGGAGGCCAGGTTGGATGTGGATCAAGAACCCATTTTGTCTAGTTACTATTTCAGTTCCATTTTGTCTCACAAATCATTAGAGAGTGCTTTGGCCAACCAACTCTCTACCAATTTGAGCAGTTTGAACCTTCCTAGCAGCACCCTTTTTGATATTTTCTTGGGTGTTTTGATTGATGATTGTGGAGATGATATCATAGGAGCCGTGAAGGATGATTTGGTTGCTGTTAAAGAGAGGGACCCTGCATGCATTAGTTATGTGCATTGTTTGTTAAATTTCAAAGGGTTTCTTGCATGCCAGGCTCACAGGATTGCTCACAAATTGTGGCTTCAAGGGAGGAAGGTTCTGGCCCTGTTGATTCAGAATAGGGTGTCTGAGGTTTTTTCTGTGGATATCCACCCTGGTGCACAAATTGGACGTGGAATTTTGTTGGATCATGCTACCGGGCTTGTGGTGGGGGAGACTGCAGCTATTGGCAATAATGTCTCAATTTTGCATAATGTGACTTTGGGAGGGACTGGTAAGTCAAGTGGCGATAGACACCCTAAGATTGGTGATGGGGTGCTAATAGGTGCAGGGACTTGTATTTTGGGAAATATTAAGATTGGTGATGGGGCTAAGATTGGTGCTGGTTCTGTAGTGTTGAAGAATGTTCCACCAAGGACTACTGCAGTTGGAAACCCTGCTAGGTTGGTTGGAGGAAAGGACAATCCAATTAAATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATATATCTCTGAGTGGTCTGATTATGTTATTTAG 1203 0.4564 MNVLVLGRFFTSPLYKTSPLTPSSIQFTPIFIHPSKLQPLHAIHLFSLSMATCVDATTPLSRKPNVPQSDDHSFNYTKFCRPNFSDRLPCIPICKNREMAFSRVEDLDTRVEDLDTRAEDGLGVLEFGAVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANQLSTNLSSLNLPSSTLFDIFLGVLIDDCGDDIIGAVKDDLVAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSEVFSVDIHPGAQIGRGILLDHATGLVVGETAAIGNNVSILHNVTLGGTGKSSGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKNVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTSYISEWSDYVI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0578 400 SMART SATase_N_2_a 132 238 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu6g0578 400 SUPERFAMILY Trimeric LpxA-like enzymes 132 370 IPR011004 -
Pvu6g0578 400 PANTHER SERINE ACETYLTRANSFERASE 50 400 - -
Pvu6g0578 400 Pfam Serine acetyltransferase, N-terminal 132 238 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu6g0578 400 Gene3D Hexapeptide repeat proteins 268 389 - -
Pvu6g0578 400 PANTHER SERINE ACETYLTRANSFERASE 50 400 - -
Pvu6g0578 400 CDD LbH_SAT 265 365 IPR045304 -
Pvu6g0578 400 Pfam Bacterial transferase hexapeptide (six repeats) 318 352 IPR001451 -
Pvu6g0578 400 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 327 355 IPR018357 GO:0016740
Pvu6g0578 400 TIGRFAM cysE: serine O-acetyltransferase 206 367 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pvu6g0578 400 Gene3D serine acetyltransferase, domain 1 127 267 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0578 Pvu-Chr6 17130900 17133097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0578 132 388 Miscellaneous Gene Families AT2G17640 54.475 1.71e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0578 K00640 - gmx:606507 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0578 6 17130900 17133097 Pvu6g0578 6 17130900 17133097 ECH
Pvu6g0578 6 17130900 17133097 Pvu8g2867 8 58552708 58553757 PCT