Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2836 ATGGAATCTCCACAGTCTATTGTGTCACCATTCAAGAACTCTGTCTTGGGTGAAGCTGAGAAGTATAAGTCTGATATTTACACGGTTCCTTTCTCTAAGGACATTGAAGTCAATGGAAAGGAAGCAGTCAGGTCCAGTTCAGAGGACTTCATTGGTGCTGTTGATGTTTACATTCATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCCAAAATTAGCTTGACTAGTAATCCTGAGAATGCTGTTTCTACCAAGACTATCAATGGAGGAGGAAGGAACCCTGTCTTCAATGAGAATCTTCGTCTAAGCGTTAGGACAGTTGATTCTGCTGTCAAATGTGAAATCTGGATGCTGAGCAGGGTGAAGAACTATCTTGAAGATCAGTTGCTTGGCTTTGCTTTGGTGCCTTTGTCAGAAGTATTGGTGAAGGAAGGCAAACTAGAGAAAGAGTTCTCTCTTTCCTCAACCGATCTGTTCCATTCACCAGCCGGTTTTGTGCAGTTGTCTCTTGCATACACAGGCACTTCGCCTGATGTTTTTGCCATTTCTGCAATGCCTACTGAGAAGGACTCCGAATCTTGCGAATCACTGGTCAGAGATTTAGACAAAATTGAATTCCCGGATCCAAAAATTGCAAATGAAGACCACCTTATGGTTTCAGAATACTTTGGTATTCCATGTGAGGAGAGTCAGTGTTCTGGTAGCTTGACCACTACTGATACTGAAAATCTGACTACTGAAGCAGGCGTTCAGCTTGTGGAGAGCTTCTCAGCATGCAGTGTGGAGTCTGCTGAACCTCCTAAGGTTGATTCTCCACCCACCAGTGTGTCAACAAATGGAGTTTCATCTCCTTCAGTGGCTGCAAGCTCAGACTCATCAGATGCTGCTGCTGCTGCTTCCAAGTCTCCCAATCAGGAACAAGTTTCAGCCAACAAAGAGAAAAATGGGGAGGTCAAAAATGGTGAGACTGATTCCTCAAATGGAGTGCTGAATGAGTCATTCCCTAAGCCTGTTGTGACAGTTAACATCGAACCTGAGTCAAACATGGTGCAGCAGGACATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACAGAGTCATTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCCGAACAGCAGAAGATACAGACACCAAAGAGCTCTAACTCCCGTGTGTTTTATGGCAGCAGGGCTTTCTTCTGA 1263 0.4418 MESPQSIVSPFKNSVLGEAEKYKSDIYTVPFSKDIEVNGKEAVRSSSEDFIGAVDVYIHQARDIHNICIYHKQDVYAKISLTSNPENAVSTKTINGGGRNPVFNENLRLSVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKEGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGTSPDVFAISAMPTEKDSESCESLVRDLDKIEFPDPKIANEDHLMVSEYFGIPCEESQCSGSLTTTDTENLTTEAGVQLVESFSACSVESAEPPKVDSPPTSVSTNGVSSPSVAASSDSSDAAAAASKSPNQEQVSANKEKNGEVKNGETDSSNGVLNESFPKPVVTVNIEPESNMVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQQKIQTPKSSNSRVFYGSRAFF* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2836 420 MobiDBLite consensus disorder prediction 268 340 - -
Pvu8g2836 420 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 420 - -
Pvu8g2836 420 ProSiteProfiles C2 domain profile. 39 158 IPR000008 -
Pvu8g2836 420 MobiDBLite consensus disorder prediction 383 410 - -
Pvu8g2836 420 Gene3D C2 domain 48 202 IPR035892 -
Pvu8g2836 420 MobiDBLite consensus disorder prediction 387 410 - -
Pvu8g2836 420 SMART C2_3c 53 156 IPR000008 -
Pvu8g2836 420 CDD C2 54 160 - -
Pvu8g2836 420 Pfam C2 domain 53 158 IPR000008 -
Pvu8g2836 420 PANTHER EXPRESSED PROTEIN 1 420 - -
Pvu8g2836 420 MobiDBLite consensus disorder prediction 277 318 - -
Pvu8g2836 420 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 182 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2836 Pvu-Chr8 58394493 58397428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2836 - - gmx:100781587 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2836 8 58394493 58397428 Pvu8g2836 8 58394493 58397428 ECH
Pvu6g0553 6 16769473 16772078 Pvu8g2836 8 58394493 58397428 PCT