Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2818 ATGGCACCCTCGATCTGTTTCCTTCTTTTATGCCTTCTGTTCCTTTCATCCTCCACGACTGGTGTTCAAGATCATGAAGAGGGTTTTGTCTCCATCACCATATCTGATAAGGGCCTTGATTTTGCCAAGGATATTCTAATAGACCAAGCTGTTGCCTCTATTGTTCTGTCCCAGTTGCCACAGATTGAGAAGACTGTTCAAGTCCCTCTTGTTGGAAAAGCCAAAGTTGTTCTTTCTGAAATCTCTATCAATGATATCCAAGTGAATTCTTCATCTGTTAATACAGGAGAGACAGGCATTGCTCTTGTTGTTTCAGGAGCCACTGCTAACTTGAGCTTGAATTGGAGGTACTCTGTCAGCAGCTGGTTAGTCCCAATTGGAATTTCTGATAGTGGAACAGCAACTGCAAGGGTTAATGATTTGCAAGTTGGACTTACTGTGAATTTAACGAATCAAGAAGGAACTCTTAAGCTGCTTCTCCTGGATTCTGGATGCCATGTCAGAGATTTGTCCATAAAGTTGCATGGTGGAGCAGCTTGGCTTTACCAAGTGCTAGTAGATGCTTTTGCAGGAAGTATAGCATCTGCAGTTGAAGAGGCAGTTTCTGAGAAAATAAATGAGGGGATATCAACTCTTGATGTGTTATTACATTCTCTTCCAAAGACTATCCCATTAGACGAAACAGCTGCTCTAAATGTTTCTTTCGTGAGCAATCCTGTGCTAAGTGATTCTGCTATTGAATTAGCCATCAATGGTTTACTCACAGGAAGGAATGAAATTTTGGCACCTCAAGGTTACCACAGAGGTTCAGGCATTTCTGTTTTCCCTGTTGACCCTTCATCAAAGATGATAACAATTTCATTGCATGAAAATGTTTTCAAATCCGGTTCCTTGGTTTACTTCACTGCAGATACTTTGCAGTGGACTGTTGATGAACTACCTGATCAAGAACTTCTGAACACTGCTGAATGGAGATTCCTCATTCCTCAATTATACAAGCAATATCCAAACGATGACATGAATCTTAATATCTCTGTGTCTTCTCCACCGGATATACAAGTGACAAACAAAGATGTTGGTGTCAAAATTTCCTTAGATATAATACTCAATGTTCTGGAAGCTGGTGAGGTCATACCTGTTGCATGCATCTCGGTGGATTTTAGTGCATCTTGTGCTGCAGAGATCTTAGGAAACAATCTTGCTGGTTGGCTTAAACTGAAAAAGTTTTCCACCAACTTGAAATGGAGTAAAATAGGGAAACTTCACATGAATCTGATTCAGTCAGTGACATCAAGTGTCCTCAAAACCGTCCTCATACCATACCTGAACTCACAGTTAATGAGGGGAATTCCATTGCCGATTCTTAATGATTTTGCTCTTGAAAATGCTCGTATATTGTATGCTCCCCCATGGATTACTGTGTCTAGTGATGTTTCTTTCTTAGGACACTATTATCACAAGCAACTACCAGCTTATGTATCATAA 1485 0.4034 MAPSICFLLLCLLFLSSSTTGVQDHEEGFVSITISDKGLDFAKDILIDQAVASIVLSQLPQIEKTVQVPLVGKAKVVLSEISINDIQVNSSSVNTGETGIALVVSGATANLSLNWRYSVSSWLVPIGISDSGTATARVNDLQVGLTVNLTNQEGTLKLLLLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGSIASAVEEAVSEKINEGISTLDVLLHSLPKTIPLDETAALNVSFVSNPVLSDSAIELAINGLLTGRNEILAPQGYHRGSGISVFPVDPSSKMITISLHENVFKSGSLVYFTADTLQWTVDELPDQELLNTAEWRFLIPQLYKQYPNDDMNLNISVSSPPDIQVTNKDVGVKISLDIILNVLEAGEVIPVACISVDFSASCAAEILGNNLAGWLKLKKFSTNLKWSKIGKLHMNLIQSVTSSVLKTVLIPYLNSQLMRGIPLPILNDFALENARILYAPPWITVSSDVSFLGHYYHKQLPAYVS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2818 494 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 494 - -
Pvu8g2818 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 32 242 IPR017943 GO:0008289
Pvu8g2818 494 Gene3D - 31 465 - -
Pvu8g2818 494 SMART bpi2_2 278 476 IPR001124 GO:0008289
Pvu8g2818 494 Pfam LBP / BPI / CETP family, N-terminal domain 38 212 IPR017942 GO:0008289
Pvu8g2818 494 Gene3D - 37 217 - -
Pvu8g2818 494 PANTHER OS06G0309200 PROTEIN 1 494 IPR045897 -
Pvu8g2818 494 Pfam LBP / BPI / CETP family, C-terminal domain 277 478 IPR001124 GO:0008289
Pvu8g2818 494 PIRSF Lipid_binding_protein 7 484 IPR030675 GO:0005615|GO:0008289
Pvu8g2818 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 246 480 IPR017943 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2818 Pvu-Chr8 58249479 58253854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2818 K05399 - gmx:100804747 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2818 8 58249479 58253854 Pvu8g2818 8 58249479 58253854 ECH
Pvu6g0508 6 16362770 16370520 Pvu8g2818 8 58249479 58253854 PCT