Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2788 ATGAAAAACCAACAACAAAACATGTCACTGCCATTAACCATCTTCACACTGACCCTTCTCTCCTTCACCCTCGCTGCAAATTCCCAAGCCTGCACTGAAGCATTCTTCAAACTGGCCCAGAAAAAGAACATCTCAGACTGCAAGAGATTGCGCACTCTGGGGGCGGAGTTCGCATGGAACCTCCACGGCAACTTCTCCGGCAACAACTCCACCGTGGTGGACATCTTGTTCGGCGCCACACTCCAAACCCAACAAGGGTGGATAGGGTGGGGAGTGAACCCCGGAAAGAGACCAGAGATGGTTGGGACCAGAGCCATCGTGGCCGTCAAACGGTCCGATGGAACGTGGAGTGTGGACACGTACAACATTACGAAGGAGATCAGAAACGGGTGCAATCTTCTGCCGTCGAAAATTGGAATTGTGGTGAGTAAGTCGGTTGAGGAAGAGGCTGATAACATGCACACGATGTATGTTAGATTGAGGCTTCCCTCTGAAGAGTATAACGTAACGAGGCTGAACCATGTGTGGCAAGTTGGGTATGGTATCGAAGGTGGGCATCCCCATCGACATCCAACAACTCTCCGGAACGTCGACAGCACAGAGGTCATAGACTTGACTGATAGCAACGGCCGTAGCACTGGACAGTACCGGAGTTATCTTAGATCGATACATGGAGTGATAAACATTATAGGGTGGGGAACCCTGTTGCCGATTGGGATTATAATTGCAAGGTACTTTCGGGTGTTTCCTTTCAAATGCGAGCCACTGTGGTTTAACCTTCACATTGGTTGCCAATTAACTGGTTTTCTTGTTGGCACCACCGGATGGGCTATTGGGCTAAGTCTCGGACATTCTTCTAGATACTACACCTTCCACGATCATCGTACTTATGCCATTCTCATTTTCGTCTTTAGCACAATTCAGATGTTGGCTTTTCGGTTAAAGCCAAAGATGACGGACGATTACAGAAAGTATTGGAACATGTACCATCATTTTCTTGGTTATGGTCTGTTTGCTATCATAATCATAAACATATTCAAAGGAATTCGCATTTTGGAAGGAGGTGTTGAATGGAAGTGGGGGTACATTGGAAATCTTGCTTTTCTGGGTGCCATCGCTTTTGGCTTGGAGGTTTACACCTGGATTCGCTTCTTCATGCTCAAGCAGAAACAGAATCAAAACAAGAACCAGAACCAGACAGAACAAATTCAGGAGGAGCAGCCACCAAAACTCAATATAATTGCCAAATAA 1251 0.4676 MKNQQQNMSLPLTIFTLTLLSFTLAANSQACTEAFFKLAQKKNISDCKRLRTLGAEFAWNLHGNFSGNNSTVVDILFGATLQTQQGWIGWGVNPGKRPEMVGTRAIVAVKRSDGTWSVDTYNITKEIRNGCNLLPSKIGIVVSKSVEEEADNMHTMYVRLRLPSEEYNVTRLNHVWQVGYGIEGGHPHRHPTTLRNVDSTEVIDLTDSNGRSTGQYRSYLRSIHGVINIIGWGTLLPIGIIIARYFRVFPFKCEPLWFNLHIGCQLTGFLVGTTGWAIGLSLGHSSRYYTFHDHRTYAILIFVFSTIQMLAFRLKPKMTDDYRKYWNMYHHFLGYGLFAIIIINIFKGIRILEGGVEWKWGYIGNLAFLGAIAFGLEVYTWIRFFMLKQKQNQNKNQNQTEQIQEEQPPKLNIIAK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2788 416 PIRSF UCP037471 2 410 IPR017214 -
Pvu8g2788 416 Coils Coil 387 407 - -
Pvu8g2788 416 ProSiteProfiles DOMON domain profile. 53 179 IPR005018 -
Pvu8g2788 416 Pfam Protein of unknown function (DUF568) 100 205 IPR045265 -
Pvu8g2788 416 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 13 402 - -
Pvu8g2788 416 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 13 402 - -
Pvu8g2788 416 Gene3D - 206 392 - -
Pvu8g2788 416 SMART 561_7 223 349 IPR006593 -
Pvu8g2788 416 ProSiteProfiles Cytochrome b561 domain profile. 188 385 IPR006593 -
Pvu8g2788 416 MobiDBLite consensus disorder prediction 396 416 - -
Pvu8g2788 416 CDD Cyt_b561_FRRS1_like 198 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2788 Pvu-Chr8 58003268 58006732 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2788 - - gmx:100791697 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2788 8 58003268 58006732 Pvu8g2788 8 58003268 58006732 ECH
Pvu6g0398 6 14782139 14783885 Pvu8g2788 8 58003268 58006732 PCT