Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0398 ATGACTTTCACTGCAAATATAGTGTTCTTCTTCACTTTTCTAATTGCCATTATTGTCCCTATCACTTCACAGCCATGCAACTCATACAGGTTTTCAAATAACATTAAGTATGCGGCTTGTGAAGATTTGCCCGTTCTTGAATCCTCGTTGCATTGGAATTACCATCCATCATCAGGTGTAGTTGATGTTGCATTCAACAAGGCCAACGCAAAGGATTCAAGTTGGGTTGCATGGGCCATAAACCCTATCTCAAAGGGCATGGTGGGTTCACAATCATTCGTGGCAGTTCATAAATCAAATGGGACCATCAAAACATATACATCATCGATAACAAGTTATGCGACGATGCTACAAGAGGGAAATCTCAGTTTTTCGGTTTATAGTCTTTCTACGTCATACACAAATGGTGGCATCATCATCTTTGCAACTTTTCAACTTCCCCCCAACAAGACTGTGGTAAACCATGCTTGGCAAGAGGGTTTGGTTTCTGAAGATGGCACTTTCAAGGCTCACTCCTTTTCACGCTCTAATCTTCAATCCTATGGAACCATCAATTTCATATCCGGCAAGGTTTCTAAATCTGATGGAGATGTGAACTCACGAACCATGTTAAAAAATGTTTATGGAATTTTGAATACTGTGAGTTGGGGAATAATGATGCCGATTGGAGTGATGATGGGTCGTTACTTGAAGGTGGTGGATGGTTTGGGAAGCACTTGGTTTCACTTGCATAGAGCATGCCAATCACTGGCCTTCTTGATCGGCATTGTTGGCTTTGGGACTGGTTTGTATATTGGAAACCACTCTGGGGTTCATCATGCTCCTCATCGATGCGTTGGAATCACTCTAATGTGTCTTGCATCTGCACAAGTTATTGTTGCTGTGTGTTTGAGGCCTAAGAAGGATCACAAATACAGAATATTTTGGAACATTTTTCATTACATAGTTGGTTATGCAACTATTGCATTGGCCATATGGAACGTCTTGAAAGGTTTTGACATTTTGAATGCTCACAATGTGTGGAAGAATAGCTATGCGGGCATAATAATATCTTTAGCTGCAATTGCTATCATTTTGGAGGTCACAACATGGATTTGGGTTTGCAACAAAAAGAGGGTCAAGAACTCTGAGGACCATGTTGCCATTGGTGAACAACTGACATAG 1164 0.4098 MTFTANIVFFFTFLIAIIVPITSQPCNSYRFSNNIKYAACEDLPVLESSLHWNYHPSSGVVDVAFNKANAKDSSWVAWAINPISKGMVGSQSFVAVHKSNGTIKTYTSSITSYATMLQEGNLSFSVYSLSTSYTNGGIIIFATFQLPPNKTVVNHAWQEGLVSEDGTFKAHSFSRSNLQSYGTINFISGKVSKSDGDVNSRTMLKNVYGILNTVSWGIMMPIGVMMGRYLKVVDGLGSTWFHLHRACQSLAFLIGIVGFGTGLYIGNHSGVHHAPHRCVGITLMCLASAQVIVAVCLRPKKDHKYRIFWNIFHYIVGYATIALAIWNVLKGFDILNAHNVWKNSYAGIIISLAAIAIILEVTTWIWVCNKKRVKNSEDHVAIGEQLT* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0398 387 CDD Cyt_b561_FRRS1_like 183 337 - -
Pvu6g0398 387 Pfam Protein of unknown function (DUF568) 87 186 IPR045265 -
Pvu6g0398 387 SMART 561_7 207 332 IPR006593 -
Pvu6g0398 387 ProSiteProfiles Cytochrome b561 domain profile. 167 368 IPR006593 -
Pvu6g0398 387 CDD DOMON_CIL1_like 37 188 IPR045265 -
Pvu6g0398 387 Pfam Eukaryotic cytochrome b561 217 332 IPR006593 -
Pvu6g0398 387 Gene3D - 184 378 - -
Pvu6g0398 387 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 6 380 - -
Pvu6g0398 387 PIRSF UCP037471 1 385 IPR017214 -
Pvu6g0398 387 ProSiteProfiles DOMON domain profile. 46 160 IPR005018 -
Pvu6g0398 387 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 6 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0398 Pvu-Chr6 14782139 14783885 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0398 - - pvu:PHAVU_006G0306001 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0398 6 14782139 14783885 Pvu8g2788 8 58003268 58006732 PCT