Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2779 ATGGAGGAGCAGACTTTCGTGTCGAAAGCGAGGATCGCCTTCCATTCCGCGGCGGCGAAAGCGGAGCGCGTGCTTATGGATTTCAAATCTGATCGAGATCACGATAGGCACTCGTCGCCGGAAGCTGATTCTCCCAACAGCAACAACAACAACAACGAAAGCGAGTCCAAGATTCGCAGTGAATTGAAGCATATAAAGTGGAGGCCTCCACATCTAGGAATAAAGCAGGATTGGCAAGATAGAATAAAGAACATCCGGAGAGGGAGAAAAGAAGTTGAAGATACAGATAAAGTTGGGGATGCGAACATGGCAATTCCATTTTACGATGATAATTTGTACACCCTGAATGTGAAGAATGATCTTGATGCCAAGGCTTCAGAATCATTTCCTTCAGTTGAAAGCCTAACTGCTGCAACTAAGGATCCCATTCCTCCGTCATCTGTACTCAAGCAATTGGCTATAGCTGTTGAGGCCGGAAGTAAAGTGAAGTCAATGAAAGAATTTATAGCTTCACCAGGAGGTTCTTCACCCGCTAAAGAGAGGGCAGGCTTGAGTCTCTCTGCAGTTAAGGCTTTAGTGCTACGTGAAAAGGAGGACAATCTTACTTCGGAGTTTAGTAGCAATGATAAAGTTGTGCAGTTAATCAGTTCTCTGTTTGATCCAGAGGGAGATTTCCTAACAAGAAAGATCAACTCTAATATAGAGGAAATTGTCATGACATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAATCATTGGAAACTACAAGACTGTCCGTAAAATGGCTCTTTTCTGGTGCAGTGTTGTTGCTGAACTAAGAAAACTTTGGTATGAGGAGCAACACTTACCAGGAGTTCCCCAGAACGAGATTCCTGATTTGAAGTCATGTCTTCTATATCAACATTTTCAAGTAATTAATTGCTGCATCTCTCGGAAAATGTTCCGCAGTATTGCCACTGAATCTTTAGACTCTATGATGATACAAGCTAGTTCAGGCACAAAAGAATCATCTGATAATAATGTTGGAGCTCCTGCAAGCCCTGTTTTATATGCTAGAGTAAACAGTGGGGAGCTTATTCTACGACTTGGTGCAGATCGTCTTGCTGGAGATATGACACTGTTGGAAACTGGCGAGCCTGTGTATTCTCCACTCACCCAGGAAGGGCCTTTGCTTACAGAAGATCTAATCAAGGAAACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGCTCCCAATTGCTGTCTGATATGCAAGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGACAATGAGGCAAGTGTCGAGGATAGTGATGTTTTTGATAGTGGTGAGTTATTGTCTGCCAGAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCAAAACCAGTACCAGCTGTTAAGCAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTAAATGCTTTTGAGGACATCCATCCATCTGATCTTTTTGAACAGCTGTTTGTTTCTTTGCTTGGTTTAGGGTTTGCAATGGCTGAACCTATGCTGTCTAGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAGTTGTCGCTTGTCAAAGCAGCAAATTGAATGAGAAAGTTGATGATCTTGTCCAGGCATATGAAACAGTGGAGAGAATGTTATTGAATCCTGAAGAAGCACTGAAGATGATTAAGCAGACAGAGGAATCAGCTATGGTTACTGATGAACCAAAGAGCCCGTTGAAGAGGCTTAGCCTTATGTTTGCCGGCAAAGATAAACTATTGAGGAGGTCTCTCTCAAAGGATCAGATAAATGATGAAGAAAAGTCTGGTCGGCAATCATTCTCAAGTTTCTTTGATAGCAAGTCATCTTTGTTCTCAAAGAAGCCGCCAAAGTCTGAATCCCCATCTCCTTCTGAGAAATCTTCTCTCGATGCTGGTTGGACAGTTGTATAG 2076 0.4335 MEEQTFVSKARIAFHSAAAKAERVLMDFKSDRDHDRHSSPEADSPNSNNNNNESESKIRSELKHIKWRPPHLGIKQDWQDRIKNIRRGRKEVEDTDKVGDANMAIPFYDDNLYTLNVKNDLDAKASESFPSVESLTAATKDPIPPSSVLKQLAIAVEAGSKVKSMKEFIASPGGSSPAKERAGLSLSAVKALVLREKEDNLTSEFSSNDKVVQLISSLFDPEGDFLTRKINSNIEEIVMTSLPRDIHGAPPESLVVKLAEIIGNYKTVRKMALFWCSVVAELRKLWYEEQHLPGVPQNEIPDLKSCLLYQHFQVINCCISRKMFRSIATESLDSMMIQASSGTKESSDNNVGAPASPVLYARVNSGELILRLGADRLAGDMTLLETGEPVYSPLTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASVEDSDVFDSGELLSARGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIHPSDLFEQLFVSLLGLGFAMAEPMLSSNSDFSKLFYDCKEYIVVACQSSKLNEKVDDLVQAYETVERMLLNPEEALKMIKQTEESAMVTDEPKSPLKRLSLMFAGKDKLLRRSLSKDQINDEEKSGRQSFSSFFDSKSSLFSKKPPKSESPSPSEKSSLDAGWTVV* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2779 691 Coils Coil 75 95 - -
Pvu8g2779 691 MobiDBLite consensus disorder prediction 26 41 - -
Pvu8g2779 691 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 4 690 IPR045700 GO:0005096|GO:0043547
Pvu8g2779 691 MobiDBLite consensus disorder prediction 26 58 - -
Pvu8g2779 691 MobiDBLite consensus disorder prediction 650 691 - -
Pvu8g2779 691 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 4 690 - -
Pvu8g2779 691 MobiDBLite consensus disorder prediction 642 691 - -
Pvu8g2779 691 Pfam Rab3 GTPase-activating protein catalytic subunit 371 523 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2779 Pvu-Chr8 57953455 57960794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2779 K18270 - gmx:100818643 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2779 8 57953455 57960794 Pvu8g2779 8 57953455 57960794 ECH
Pvu6g0482 6 15973838 15981304 Pvu8g2779 8 57953455 57960794 PCT