Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0482 ATGGAGCCTCACGCGACTTCTTTCGTGTCCAAGGCGCGCATCGCGTTCCATTCCGCTGCAGCCAAAGCGGAGCGTGTTCTGTTGGACTTGAAATCCGATCGAGATTCCGATAAGCAATTTCACGACGAGTTAGGGAGGCGGCGGGGCGATGAATCTGCTCGGAGCGAGCACGAGTCCAAGTTTATCAATGAACTGAAACATATAAAGTGGAGACCTCCGCATATAGGAACAAAGCGGGATTGGCAAGACAAAATAAACAACATTCGAAAAGGGAGAAAAGAAGTTGAAGTAACAGATAAAGTTGGCGACATAAACATGGCCTCCGCTCCATTTTATGATGAAAGTTCGTACACTCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCTGAATCAATTCCCTCGGTTGAAGGCTTAACTGATGCGACTGAATACCCCATCCCTCCATCGTCTGTCCTGAAGCAGTTGGCTATAGCTTTTGAGGCTGGAAGGGGAACAAACTCAATGAAAGATTTTGTAGCTTCATCAAGTGGTTCATCACCTGCCAGAGAGAGGTCAGGCTTAAGTCTATCTTCGATGAAGGCTTTAGTGTTGCGTGAAAAGGAGGGCAAACTTACCTCTGAGTTCAGTAGCGATGAGAAAGTTCTGTACTTGATTAATTCATTGTTTGATCCAGAGGGAAAGTTCCTTCGAAGGAAGATCAACTCTGATCCAGAGGAAACTTTCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCTTAGTTGCTAACCTAGCTGAAGTAATTGGAAACTTAAAGACGCTCCAAGAAATGGCTCTCTTTTGGTGCAGGGTTGTTTCTGAACTGAGAAAACATTGGTCCAAAGAGAAATATTTACCTGGAATCCCCCAAGATGACATTCCAGATCTGAAGTATTGTCTTCTGTATCAAAAATTTCAAGTAATTAATTGTTGCATTTCTCGGAAAAGGCGCTATATTATTGCCACTGAATCACTAAACTCTATGATGGTGGAAGCCAATTTAAACACATTAGAACCAGCAAAGTACTCAGACAAAATTCCTGCAACCCCTTTATTATATGCAAGGTTAAGAACTGGAGAGCTTGTTCTTCGGCTTGGGGCTGATTGCCCATCAGGAGATTTGATGTTACTAGAAACAGGCGAGCCTGCATTCTCTCCTGTCACCCAGGAGGGACCATTGCTTACAGAAGATGTGATCAAAGAGACAGAGGAGTTTGTGCTCCGGACAGGAAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTATTCTCCCCCTGACTGGACTGAAAGTGAGGGAAGTAGTGAGGATAGAGACTCTTTTTATTGTGGTGAGTCAATGTCTGCAAGAGGTCAACTAAGTCTACGTATGCAAAAGGAAGGTAATTTGTGGCGTGAATTATGGGAAACATCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAGGGTATTCTAGATGCATTTGAGGACATTCCGCCTTCGGAGCTTTTCGAACAGCTGTTTGTTTCTCTTCTGGGTTCAGGATTTGCAATTGCTGAAAATATGCTCTCTGGTGACGTTGACATTTCAAAATCCTTAAATGACTGCAAGGACTACATAGTTACCGCTTGTCAAAGCAACAGATTCAATGAGAAACTCGATAAGCTTGTTCAGATGTATGAAATGGTGGAGAAGATGATGCTGAATCCAGATGAGGCAGTGAAGATAGTAAAGGTCATGGAAGAATCAAGTATGACTACTACTAGTGAACCAAAACGGCGTATGTCTACTGGTGAACCGAAGCAGCGGTTAAAGCAACTTAGCCATATATTTGGTGGCAAAGATAAAGCATTGAACAGGTCTGTCTGGAAAGAAGAGGTAAACGATGAAAAAAAGCTGGTTCGACATTCCTTCTCAAGTTTCTTTGACAACAGCAAGTCATCTTTATTTTCAAAAAAGCCTCCTAAGCATGGAAACCAGTACCCTGTCGATCAATCTCTCTCTCCGGAAAGGGATTGGACAGTTCTTTAG 2124 0.4331 MEPHATSFVSKARIAFHSAAAKAERVLLDLKSDRDSDKQFHDELGRRRGDESARSEHESKFINELKHIKWRPPHIGTKRDWQDKINNIRKGRKEVEVTDKVGDINMASAPFYDESSYTLNVKNDLDAKASESIPSVEGLTDATEYPIPPSSVLKQLAIAFEAGRGTNSMKDFVASSSGSSPARERSGLSLSSMKALVLREKEGKLTSEFSSDEKVLYLINSLFDPEGKFLRRKINSDPEETFISSLPRDIHGAPPESLVANLAEVIGNLKTLQEMALFWCRVVSELRKHWSKEKYLPGIPQDDIPDLKYCLLYQKFQVINCCISRKRRYIIATESLNSMMVEANLNTLEPAKYSDKIPATPLLYARLRTGELVLRLGADCPSGDLMLLETGEPAFSPVTQEGPLLTEDVIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESEGSSEDRDSFYCGESMSARGQLSLRMQKEGNLWRELWETSKPVPAVKQAPLYDEDLAVEGILDAFEDIPPSELFEQLFVSLLGSGFAIAENMLSGDVDISKSLNDCKDYIVTACQSNRFNEKLDKLVQMYEMVEKMMLNPDEAVKIVKVMEESSMTTTSEPKRRMSTGEPKQRLKQLSHIFGGKDKALNRSVWKEEVNDEKKLVRHSFSSFFDNSKSSLFSKKPPKHGNQYPVDQSLSPERDWTVL* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0482 707 MobiDBLite consensus disorder prediction 680 707 - -
Pvu6g0482 707 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 706 IPR045700 GO:0005096|GO:0043547
Pvu6g0482 707 Pfam Rab3 GTPase-activating protein catalytic subunit 375 527 IPR026147 -
Pvu6g0482 707 MobiDBLite consensus disorder prediction 35 57 - -
Pvu6g0482 707 MobiDBLite consensus disorder prediction 615 634 - -
Pvu6g0482 707 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0482 Pvu-Chr6 15973838 15981304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0482 K18270 - gmx:100800515 1123.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0482 6 15973838 15981304 Pvu6g0482 6 15973838 15981304 ECH
Pvu6g0482 6 15973838 15981304 Pvu8g2779 8 57953455 57960794 PCT