Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2775 ATGGGTCAGATCGTGCGGAGGAAGAAGAAGGGGCGTCCCTCCAAGACAGATCTAGCTCGACGCTCCGGTCAATCTCCGGCGGCTTCCCAGCCAGACCTCCGACGGAGCCGCCGCCGCCGGAATGTGCGCTACAACATCGACTACGACGACTACCTTGACGAGGAGGATGAGGACGAGGAGGAGGACGAGAGGAGGCGGGAGAAGAAAAAGCTCAAGCTCGTGGTGAAGCTCAACAACCACGAGGAGGAGGACGATGACGAGGAGGACGACGCGCCGAGTCATGCAGGGGCGCGTGAGGTGCACGCGCCGGAGGAAGCGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGGGAATGGGGGAATGAGGAGGGGAATGAGGAGGCGGAGGAGCAGGAAGAAGAGCGCAAAGGGCAGAAAAGTGGATTCTAAAGGGCTCCACTCAGCTTCAGTTTTAGGAACTCCGTCGAAGCTTCCACCTGGGATTCCACCTGGGATTCAACCTGGGATTCCGTTGCCTGACAAGAGGACCCTGGAGTTGATCCTTGACAAGCTTCAGAAGAAGGACACATATGGTGTGTATGCGGAGCCGGTTGATCCAGAAGAGCTTCCTGATTATCATGATGTAATTGAGCATCCAATGGACTTTGCCACAGTGAGGAAGAAGTTGGCAAATGGATCCTATTCTACCTTTGAACAATTTGAGAGTGATGTGTTTTTGATTTGCTCGAATGCAATGCAATACAATGCAGCGGAGACTATATACCACAAACAGGCAAGATCGATACAAGAACTGGCAAGGAAAAAGTTTGAAAAGTTACGGTTTGACTTGGATCGCTCACAGAGTGAGCTGAAGTCTGAACAAAAAACTAGATCTAATTCCCTGGTTAAGAAGCCAGCAAAGAAGCCATTTGGTCATACTTCACAGGAACCTGTTGGCTCTGATTTTTCCTCAGGTGCAACTCTTGCTACTATTGGAGATGTGTTGCCAACATCCCATCCAATGCAAGGCATCGTTTGTGAAAGGCCTGGTAATATTGATGGCCTTGTGGAGGGGAATGCTTTCGTGATTGATGCAAATCAAGAGAAAGCAGAAGACTACATATCAGGGAGGGGTATGCTCTCCAAGTCGGGAAGGAAACCATCTATGCAAGATATGGAACGTCGTTCAACTTATAATATGCCCAATCCACCAGTTACTAGATCGGATTCTGTATTTACGACATTTGAGGGTGAAGTGAAGCAGCTAGTTACTGTTGGACTTCAAGCTGAACACTCCTATGCCAGGAGTTTGGCTCGTTTTGCTGCTACTCTAGGACCTACAGCTTGGAAAATCGCTTCCCAGAGGATTCAGCATGCACTCCCACCTGGCTGTAAATTTGGTCCTGGTTGGGTTGGAGAGTATGAACCACTTCCAACACCAGTATTAAAGCTTGATAATCTTGCCCAGCAACAACCTAGTTTGGGGACTAAGTTGCAGTCTACTGCTGAATTAATAAAGGTTGACAAAAATTGTAAGAATGTGGAATCCACCATGGAACATCCTGTTAATGGACCAATCCATGAGGGAAAACAGCCTTCAGTATGTTCTAGTAGTGGGCTTACATCAGATGGCAAATCATCTTTGTTTGGTTCTGCTATACCAAGACCCAATTCTCATGACAATATCTTTTATCAGCAGCCCAATGTCCAAACTAGGAACCTCAACAAGTCTGAGAACAAGGGTTTGAAACAAGTGGAATTAAACTCTTTACCCTCCAGTGATCATAAAAATGCCAGTCTAGTTGCAAAGCTTACAAGTAATACTCCTGCAGCAGCGTCTAAGCCCAGAGAAATGATACCTAGTAACTTGACTATTTTACCTTCTATGCCTTTCAAGCAGCCAGACACCAACGGAGTTGTTAGTGGAGAGTTACCCAATGGAAAAGTAAGGGGTACTAGTTTAAACAGACGGATGCCTGGTGCATCATCCGAAAGTACATCAAATCAACCAGGCAGATCATCTCCCTATGTTACCCATGGGCAGGAGCAGACTCTTAGTGACCCAGTTCAGTTGATGAGGATGTTAGCCGAAAAGACACAAAAACAACAGACTTCTAGTTCATCCAATCATTCCCCTGCTGACACCCCACCAGTGACACCATCAGTTCCATCAGGACGTAGAGAGGATTCAAGCAATGCTTCAGCAGCAGCTGCCCGTGCATGGATGTCTGTTGGTGCAGCAGGTTTTAAACAAGGACCTGAAATTTCTACTTCACCCAAAAATCAGATTTCTGCAGATTCATTGTACAACCCAGCGCGAGAGTTCCATCAGCCCTTCCCACGAATTAGGGGAGAGTTTTCTCCTGGTGGAACTCCTTTCCAGTCTGAGAAGAACAATTTTCCATTTCAGGCACTTGTACCCCAATCTCAACCTATTCAACCAGTTGGTGCTTCACCGTTTCCAAACAGACCTATGGCTTTCCCTCAAGTAGCAGCTTCTGACTTGTCAAGATTTCAGATACCACCTTGGCGGGGTATCCGACCTCACAGTCAACCAAGACAGAAACAGGAAACACTTCCTCCTGACCTGAACATTGGTTTCCAACCTCCTGGGTCACCTGCGAAACAATCATCTGGTGTGCTGGTTGACTCTCAGCAACCAGACCTTGCTTTGCAACTGTGA 2667 0.4781 MGQIVRRKKKGRPSKTDLARRSGQSPAASQPDLRRSRRRRNVRYNIDYDDYLDEEDEDEEEDERRREKKKLKLVVKLNNHEEEDDDEEDDAPSHAGAREVHAPEEAEEEEGEEEEEEEGNGGMRRGMRRRRSRKKSAKGRKVDSKGLHSASVLGTPSKLPPGIPPGIQPGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYSTFEQFESDVFLICSNAMQYNAAETIYHKQARSIQELARKKFEKLRFDLDRSQSELKSEQKTRSNSLVKKPAKKPFGHTSQEPVGSDFSSGATLATIGDVLPTSHPMQGIVCERPGNIDGLVEGNAFVIDANQEKAEDYISGRGMLSKSGRKPSMQDMERRSTYNMPNPPVTRSDSVFTTFEGEVKQLVTVGLQAEHSYARSLARFAATLGPTAWKIASQRIQHALPPGCKFGPGWVGEYEPLPTPVLKLDNLAQQQPSLGTKLQSTAELIKVDKNCKNVESTMEHPVNGPIHEGKQPSVCSSSGLTSDGKSSLFGSAIPRPNSHDNIFYQQPNVQTRNLNKSENKGLKQVELNSLPSSDHKNASLVAKLTSNTPAAASKPREMIPSNLTILPSMPFKQPDTNGVVSGELPNGKVRGTSLNRRMPGASSESTSNQPGRSSPYVTHGQEQTLSDPVQLMRMLAEKTQKQQTSSSSNHSPADTPPVTPSVPSGRREDSSNASAAAARAWMSVGAAGFKQGPEISTSPKNQISADSLYNPAREFHQPFPRIRGEFSPGGTPFQSEKNNFPFQALVPQSQPIQPVGASPFPNRPMAFPQVAASDLSRFQIPPWRGIRPHSQPRQKQETLPPDLNIGFQPPGSPAKQSSGVLVDSQQPDLALQL* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2775 888 MobiDBLite consensus disorder prediction 282 318 - -
Pvu8g2775 888 ProSitePatterns Bromodomain signature. 193 249 IPR018359 -
Pvu8g2775 888 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 888 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 651 677 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 1 15 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 126 141 - -
Pvu8g2775 888 SUPERFAMILY Bromodomain 155 274 IPR036427 GO:0005515
Pvu8g2775 888 Coils Coil 52 72 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 516 536 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 627 677 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 62 80 - -
Pvu8g2775 888 Gene3D - 174 295 IPR036427 GO:0005515
Pvu8g2775 888 PRINTS Bromodomain signature 204 220 IPR001487 GO:0005515
Pvu8g2775 888 PRINTS Bromodomain signature 220 238 IPR001487 GO:0005515
Pvu8g2775 888 PRINTS Bromodomain signature 238 257 IPR001487 GO:0005515
Pvu8g2775 888 CDD Bromodomain 175 271 - -
Pvu8g2775 888 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 888 - -
Pvu8g2775 888 SMART bromo_6 168 276 IPR001487 GO:0005515
Pvu8g2775 888 MobiDBLite consensus disorder prediction 692 732 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 865 888 - -
Pvu8g2775 888 Pfam Bromodomain 181 261 IPR001487 GO:0005515
Pvu8g2775 888 MobiDBLite consensus disorder prediction 692 710 - -
Pvu8g2775 888 ProSiteProfiles Bromodomain profile. 187 257 IPR001487 GO:0005515
Pvu8g2775 888 MobiDBLite consensus disorder prediction 836 888 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 373 400 - -
Pvu8g2775 888 MobiDBLite consensus disorder prediction 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2775 Pvu-Chr8 57905218 57909958 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2775 K22184 - gmx:100799986 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2775 8 57905218 57909958 Pvu8g2775 8 57905218 57909958 ECH
Pvu6g0476 6 15931762 15938069 Pvu8g2775 8 57905218 57909958 PCT