Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0476 ATGGTTCAGATCGCGAGGAGGAAGAAAGGGCGGCCGTCAAAGGCGGATCTGGCGCGCCGTTCCGGTGAATCTCCGGCAGCCGAGTCGCCGTCCGATCTCCGGCGAAGCCACCGGCGCCGGAGCGTGAGGTACAACATCATCGACTACGACGGAGACTACCTCGACGACGAGGAGGACGAGAGGAGGCGCGAGAAGAAGAAGCTCAAGCTCATGGCGAAGCTGAACCAGGATGGCGAAGAAGAGCGTGAAGAAGAAAACGACACGACGCGGAGCGGTACTTGCGCTGATGCACCGGCGGAAGAATACGAAGAAGACGAAAACGAGCAAGAGGAAGAGCACGAACACGAGCAAGAGGAAGAGCAGGAAGAAGACGAAGACTGTGTGGTAAAGGGCAGAAAAGTAGAATCGAAAGGGCTCCACTCTATTTCTGTTTCAGGAACTCCGGTGATTCTTCAATCTGGGATTCCGTTGCCTGATAAGAGAACTCTGGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACTTATGGTGTGTTTGCGGAGCCTGTTGATCCAGAAGAGCTTCCTGATTATCATGATGTGATAGACCATCCTATGGACTTTGCCACTGTGAGGAAGAAGTTGGCAGCTGAATCTTATACTACCTTAGAACAATTTGAGAGTGATATATTGTTAATTTGCTCAAACGCAATGCAATACAATGCAGCAGAGACTATATACCACAAACAGGCACGATCAATACAAGAACTTGGACGGAAGAAGTTTGAGAAATTAAGGATTGGCTTTGAACGATCTCAGATGGAGCAGAAATCAGAACAAAAAGCAGGATCTAATTATTTGGTTAAGAAGCAACCAAAGAAGCCTCTAGTACGTGCCTCACAGGAACCTGGTGGTTCTGATTTCTCTTCAGGAGCAACTCTTGCTACTAATGCAGATATACAGCCAACTTCCCATCCGATGCAAGGGGGTAGATGTGAGAGGCCTGGCAATATTGATGGTATTTTGGAGGCAAATGCTTTCTGGATTGATGCAAATCAAGAGAAAGCTGAAGACTTTTTATCAGGGAAAGGCCTTCACTCTAATAAGTGGGGAAGGAAGTCTGTTGTGCTTGACGAAAGTCGGCGTGCATCTTATAACATATCCAGTCAACCAATTGGTCGTTCAGAATCGATTTTTATGACTTTTGACAGTGAAATGAAGCAGCTGGTTGCTGTTGGACTTCATGCAGAATATTCCTATGCTAGAAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCCATTGCTTGGAAAATTGCTTCCCACAGGATTGAGCAGGCACTGCCACCTGGCTTTAAATATGGTCGTGGTTGGGTTGGAGAGTACGAACAGCTTCCAACCCCAATATTAATGGTTAATAATCAGGTCCAAAAAGCAACTAGTTTGGTCATGAAGTTGCATTCTACTATTGAATTAACAAAGGCTGACAAAAATTGTAAGAATGTGGAACCCAGCATTGAACATCCTGTACATGGACAGAGGCTTGAAGGAAAATATCCTTTGATGCCTGATTCCGAAGGAAAACCTTTCTTTGGTTCTGCTGGAGTAAGGCTCTGTGCTCCTGCCAACATCCTAAATCAGGAGCAGAACAAACAATCCAGGAAAATAGGCAAACCTGAAGATAAGGGTTTGAAACAAGACGGGTTGAATTCTTTATCCTCAAGTAAGCAGAATAATAAAGGTCTGGGTGCGAAGCTTACTAGTAACACTCCTGCAGCAGAGTCCAAGCCCACAGAGATGGTGACAGGGAACGTGTTCAAGCAGCCAGATGTTAGTGGAGAGTTGCCTAATGGAAAAGTGAAAAATACAAGTTTAAACAGACAGGTCACTGGTCCATCACCCGAAAGTACATCAAACCAATCAAGCAGGGCAGGTCCTGTTGTCCATGGGAAGGAGCTAGGTGTTTGTGACCCTGTTCAGTTGATGGGAATGTTTGCAGAAATGGCTCAAAAGCAACACAATTCCAATCATTTGCTTGTTGATACTCCACCAGTGACACTATCGAGTCCATCTGGACAGAGAGATGATTTAGGCAATGCTTCCGCAGCAGCTGCCCGTGCATGGATGTCTGTTGGGGCTGGAGGGTTCAGACAAGGTCCGGATAATTCTAGTTCACCCAAAAATCAGATATCTGCAGATTCTTTGTACAACTCAACAAGAGAGTTCCATCAGCATATTTCAAGAATTCGAGGGGAGTTTCCCTCTGCTGGAATGCCTTTCCAACCATTTCAAGCACTTGCTCCTCAATCTAGTCACACTGGCACTGTTTCACAGTTTCCCAACCGGCCTATGGTTTTCCCTCTGTTGGCATCTGCTGACCAATCTAGATTTCAGATACAGTCCCCTTGGCGAGGACTAAGTCCTCGTAGCCAGTCAAGGCAGAAACAGGAAACCTTTCCACCTGACCTGAATATTGGTTTCCAACCTCCAGGGTCACCTGCAAAACAATCTTCTGGTGTCCTTGTTGACTCACAGCAACCGGACCTGGCTTTGCAACTATGA 2538 0.4634 MVQIARRKKGRPSKADLARRSGESPAAESPSDLRRSHRRRSVRYNIIDYDGDYLDDEEDERRREKKKLKLMAKLNQDGEEEREEENDTTRSGTCADAPAEEYEEDENEQEEEHEHEQEEEQEEDEDCVVKGRKVESKGLHSISVSGTPVILQSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEELPDYHDVIDHPMDFATVRKKLAAESYTTLEQFESDILLICSNAMQYNAAETIYHKQARSIQELGRKKFEKLRIGFERSQMEQKSEQKAGSNYLVKKQPKKPLVRASQEPGGSDFSSGATLATNADIQPTSHPMQGGRCERPGNIDGILEANAFWIDANQEKAEDFLSGKGLHSNKWGRKSVVLDESRRASYNISSQPIGRSESIFMTFDSEMKQLVAVGLHAEYSYARSLARFSASLGPIAWKIASHRIEQALPPGFKYGRGWVGEYEQLPTPILMVNNQVQKATSLVMKLHSTIELTKADKNCKNVEPSIEHPVHGQRLEGKYPLMPDSEGKPFFGSAGVRLCAPANILNQEQNKQSRKIGKPEDKGLKQDGLNSLSSSKQNNKGLGAKLTSNTPAAESKPTEMVTGNVFKQPDVSGELPNGKVKNTSLNRQVTGPSPESTSNQSSRAGPVVHGKELGVCDPVQLMGMFAEMAQKQHNSNHLLVDTPPVTLSSPSGQRDDLGNASAAAARAWMSVGAGGFRQGPDNSSSPKNQISADSLYNSTREFHQHISRIRGEFPSAGMPFQPFQALAPQSSHTGTVSQFPNRPMVFPLLASADQSRFQIQSPWRGLSPRSQSRQKQETFPPDLNIGFQPPGSPAKQSSGVLVDSQQPDLALQL* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0476 845 MobiDBLite consensus disorder prediction 98 125 - -
Pvu6g0476 845 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 845 - -
Pvu6g0476 845 ProSiteProfiles Bromodomain profile. 171 241 IPR001487 GO:0005515
Pvu6g0476 845 SUPERFAMILY Bromodomain 156 258 IPR036427 GO:0005515
Pvu6g0476 845 MobiDBLite consensus disorder prediction 822 845 - -
Pvu6g0476 845 MobiDBLite consensus disorder prediction 559 589 - -
Pvu6g0476 845 Gene3D - 158 278 IPR036427 GO:0005515
Pvu6g0476 845 MobiDBLite consensus disorder prediction 266 306 - -
Pvu6g0476 845 PRINTS Bromodomain signature 174 187 IPR001487 GO:0005515
Pvu6g0476 845 PRINTS Bromodomain signature 188 204 IPR001487 GO:0005515
Pvu6g0476 845 PRINTS Bromodomain signature 204 222 IPR001487 GO:0005515
Pvu6g0476 845 PRINTS Bromodomain signature 222 241 IPR001487 GO:0005515
Pvu6g0476 845 SMART bromo_6 152 260 IPR001487 GO:0005515
Pvu6g0476 845 MobiDBLite consensus disorder prediction 537 642 - -
Pvu6g0476 845 MobiDBLite consensus disorder prediction 42 90 - -
Pvu6g0476 845 CDD Bromodomain 159 255 - -
Pvu6g0476 845 Pfam Bromodomain 165 245 IPR001487 GO:0005515
Pvu6g0476 845 Coils Coil 99 126 - -
Pvu6g0476 845 MobiDBLite consensus disorder prediction 609 637 - -
Pvu6g0476 845 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 845 - -
Pvu6g0476 845 Coils Coil 54 74 - -
Pvu6g0476 845 MobiDBLite consensus disorder prediction 1 128 - -
Pvu6g0476 845 ProSitePatterns Bromodomain signature. 177 233 IPR018359 -
Pvu6g0476 845 MobiDBLite consensus disorder prediction 794 845 - -
Pvu6g0476 845 MobiDBLite consensus disorder prediction 794 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0476 Pvu-Chr6 15931762 15938069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0476 K22184 - gmx:100792844 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0476 6 15931762 15938069 Pvu6g0476 6 15931762 15938069 ECH
Pvu6g0476 6 15931762 15938069 Pvu8g2775 8 57905218 57909958 PCT