Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2698 ATGAGTATAAATTCAAACTTAGGGTCGAAGCCATTCCCAGTGAGTTTCAAAAGCTGGTGCACCTTTCTTTTCTGTGTGTCTCCCCTCAATTTGACATTATCCAAAACAACAATGGCCACCCCAATCAGACACCCTTCTCATAAGTCTAAAGAGCACTTCAAAGTCTGTTTCTGTTTCAGGAGAATGTTTAGGCTCAAAGTGGCTGAACCCCCAGATGAAATCAAGACTATTTTTGAAGAGTATTCACATAATGGAGTGATGAGCATGGATAATATGTGCAATTTCTTGGTTGAATATCAAGGAGAAGAAGAGGAAGGTATCACCACACGTGCTCAGACCATTTTTGACAGTCTCAAGCATCATCACAACATATTTCAAAGGAGAGGCTTTCATGTTGATGCCTTCTTCCGTTACCTCTTAAGTGACCTTAATGGTCCCCTTACTCAGGTGCAGCATGACATGAATGCTCCTTTGGCTCATTATTTCTTGTACACAGGGCACAACTCCTATTTAACTGGAAATCAAGTTAGCAGTGCTAGCAGCACTTCTGCGATAATAAAGGCATTGAAGAAAGGAGTGAGAGTAATTGAGCTAGATTTATGGCCAAATTCCAGAGGCGACGATGTGCTAGTTCATCATGGAGGGACTCTGACTTCTTCAGTGAAACTGAGACCTTGTCTGATTGCCATTAAGGACAATGCATTTTCTGCCTCTTCATATCCTGTTGTTATAACTTTTGAAGACCATATCACTCCACATCTTCAAGACAAAGTGGCTAAGATGCTCATTGACATATTTGGGGAGATGTTATTTTGCCCTGAAAATCCACACCAAATGAGGGAATTCCCTTCTCCAGAAGAATTGAAGAACAAAATTCTGATTTCAACTAAACCACCTGAATCTCCTGAAAATAAGGACCAAAAGACACTAGAGGAAACACCACAGAGGCTTGAGGAAGATCATGACAAATCTAGAGTCAATTACAAGGATGATTCAGATGATTCTGATGGTTTAGATGATACTCCTAAATATGGGAATTTGATTTCCATTCGTGCAGGGAAGCCTAAAGGTAAGTTAAAAAAATGTTTGGTTGATCATAACCAAGTTAGACGCCTAAGCTTGAGTGAGCAAGAACTTGAAGATTTTTCAAAAAAACATGGAACTGACATTGTCAGATTCACCCAAAGAAATTTGCTTAGAATATATCCAAAGGGTACTCGTGTTGATTCGTCTAATTATGATCCCATGCTTGGGTGGATGCATGGAGCTCAAATGGTAGCATTTAATATGCAGGGAGGAAGACACTATCTTAGGTACATGGAAGGAATGTTCAGAGCCAATGGTGGCTGTGGTTACGTTAAAAAACCAGACATATTGCTGAATCAAAACGACATTTTTGATCCAAAAGCATCTCGGCAAGTCCAAACAACTCTTCAGGTTTTGGTATACATGGGTGATGGGTGGCGTTCCGATTTCGGCCCAACGCATTTTGACTTTTATTCTCCTCCTGACTTCCGTGTACAGATTGGTATTCATGGTGTGGAAGCTGATAAAGATATGAAATACACAAGTACAATTGAAGATGATTGGGTACCAGTGTGGAATCAGCAATTCAGTTTTAGACTCACAGTTCCTGAATTGGCTCTTCTATACATCAAAGTTGTCGAACGTGATTTTTCTGGAAAACATGACTTTGGTGGACAGACATGTTTACCTGTCTCTCAACTAAGACAAGGCATTCGTGCTGTTCGTTTGCGCAATCGCAAAGGTGAACTTTACAACTCTGTTAAGCTTCTCCTCCATTTTCAGTTCCATCATCACACTCTATAA 1830 0.4027 MSINSNLGSKPFPVSFKSWCTFLFCVSPLNLTLSKTTMATPIRHPSHKSKEHFKVCFCFRRMFRLKVAEPPDEIKTIFEEYSHNGVMSMDNMCNFLVEYQGEEEEGITTRAQTIFDSLKHHHNIFQRRGFHVDAFFRYLLSDLNGPLTQVQHDMNAPLAHYFLYTGHNSYLTGNQVSSASSTSAIIKALKKGVRVIELDLWPNSRGDDVLVHHGGTLTSSVKLRPCLIAIKDNAFSASSYPVVITFEDHITPHLQDKVAKMLIDIFGEMLFCPENPHQMREFPSPEELKNKILISTKPPESPENKDQKTLEETPQRLEEDHDKSRVNYKDDSDDSDGLDDTPKYGNLISIRAGKPKGKLKKCLVDHNQVRRLSLSEQELEDFSKKHGTDIVRFTQRNLLRIYPKGTRVDSSNYDPMLGWMHGAQMVAFNMQGGRHYLRYMEGMFRANGGCGYVKKPDILLNQNDIFDPKASRQVQTTLQVLVYMGDGWRSDFGPTHFDFYSPPDFRVQIGIHGVEADKDMKYTSTIEDDWVPVWNQQFSFRLTVPELALLYIKVVERDFSGKHDFGGQTCLPVSQLRQGIRAVRLRNRKGELYNSVKLLLHFQFHHHTL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2698 609 MobiDBLite consensus disorder prediction 295 349 - -
Pvu8g2698 609 Gene3D Phosphatidylinositol (PI) phosphodiesterase 151 471 IPR017946 GO:0006629|GO:0008081
Pvu8g2698 609 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 371 457 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2698 609 SUPERFAMILY PLC-like phosphodiesterases 152 461 IPR017946 GO:0006629|GO:0008081
Pvu8g2698 609 ProSiteProfiles C2 domain profile. 454 587 IPR000008 -
Pvu8g2698 609 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 477 604 IPR035892 -
Pvu8g2698 609 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 373 459 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2698 609 SUPERFAMILY EF-hand 48 149 IPR011992 -
Pvu8g2698 609 PRINTS Phospholipase C signature 157 175 IPR001192 GO:0035556
Pvu8g2698 609 PRINTS Phospholipase C signature 183 203 IPR001192 GO:0035556
Pvu8g2698 609 PRINTS Phospholipase C signature 281 298 IPR001192 GO:0035556
Pvu8g2698 609 PRINTS Phospholipase C signature 398 419 IPR001192 GO:0035556
Pvu8g2698 609 PRINTS Phospholipase C signature 419 437 IPR001192 GO:0035556
Pvu8g2698 609 PRINTS Phospholipase C signature 571 581 IPR001192 GO:0035556
Pvu8g2698 609 MobiDBLite consensus disorder prediction 301 340 - -
Pvu8g2698 609 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 50 605 - -
Pvu8g2698 609 CDD C2_PLC_like 476 604 - -
Pvu8g2698 609 Gene3D C2 domain 472 608 IPR035892 -
Pvu8g2698 609 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 152 297 - -
Pvu8g2698 609 SMART plcy_3 344 460 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2698 609 SMART plcx_3 152 297 IPR000909 -
Pvu8g2698 609 Pfam Phosphatidylinositol-specific phospholipase C, X domain 154 297 IPR000909 -
Pvu8g2698 609 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 50 605 IPR001192 GO:0035556
Pvu8g2698 609 SMART C2_3c 477 585 IPR000008 -
Pvu8g2698 609 Pfam Phosphoinositide-specific phospholipase C, efhand-like 72 142 IPR015359 -
Pvu8g2698 609 Pfam C2 domain 504 579 IPR000008 -
Pvu8g2698 609 Gene3D - 69 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2698 Pvu-Chr8 57384500 57393191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2698 49 604 Acyl Lipid Metabolism Gene Families AT3G55940 54.096 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2698 K05857 - gmx:100817915 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2698 8 57384500 57393191 Pvu8g2698 8 57384500 57393191 ECH
Pvu8g2698 8 57384500 57393191 Pvu1g2515 1 50275158 50280462 ECH
Pvu8g2698 8 57384500 57393191 Pvu8g2317 8 53746620 53752061 ECH