Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2317 ATGTCGAAGCAGACATACAGCGTGTGCTTCTGCTGGCGCCGGCGGTTCAAGCTGGCCCTGGCGGAGGCGCCGTCGGAGATCAAGACCCTCTTCGAGGACTACGCTGAGAATGAGATCATGACACCTTCGCATCTGAAAAGGTTCCTTGTTGAAGTGCAAAAGCAAGAGAAGGCCACTGAAGAAGAGGCGCAAGTCATCATCGACAGCTTCAGGCATTTCCATCGCAGAAGCGTTGGCCTCAATCTCGAATCTTTCTTCAAGTACCTCTTCAGTGATGATAACCCCCCTCTTATTCCTTCTCGTGGGGTGCACCATGATATGACTTTACCCTTGTCACATTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATCAGTTGAGCAGCGACTGCAGTGACGTGCCCATTATAAATGCACTAAAGAGAGGGGTGAGGGTGATTGAATTGGACATATGGCCTAATGCAACAAAGGATAATATAGATGTTCTTCATGGAAGGACGTTGACTGCTCCTGTAGAGCTCATCAGATGTTTGAGATCTATTAAGGAACATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACACCGGATCTTCAGGCTAAAGTGGCTGAGATGGTTACAAACACTTTTGGAGACATACTATTTACTCCTAACACCGAAAGTGTGAAGGAGTTCCCTTCTCCTGAATCACTTAAGAGGAGGATTATTATATCAACAAAACCACCTAAGGAGTATCTTGAAGCAAAAGAAAAGGATAAAGGGGATGATTCACAGCAGTTAAAGGAAAAGGGGGATGTTTCACTACGCCGAAAGGGTTCAAGTGAGGATGAAGCTTGGGGAAAGGAAGTCCCTAGCTTGAAAGGTGGTACGATAGAGGATTACAAGGACAACAACGAGGATGAAGATCTTAATGACGAGGAAGAATTTGATGAATCAGATAAGTTACCTAATAATAATGAAGCTCCAGAATATAGACGCCTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAGAGGAATGCCTCAAAGTGGACCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAAATCATGGAAAACAAATTGTAAGATTTACTCAGCGCAATATTTTGAGGGTGTATCCCAAGGGTACTCGCATTGACTCGTCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGTAGATCTCTTTGGTTGATGCAAGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGAGTTTCTGTTAGAGACTGGTCCAGACAATGAGGTCTTCGACCCTAAAGCCAAGTTACCTGTGAAGACTATTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTATTATGATTTCAAGCATACGCACTTTGATCAATACTCACCTCCAGACTTCTATACAAGAGTGGGGATTGCTGGAGTCTCTAGTGACACTGTAATGAAGAAAACTAGGGCAATAGAGGATAATTGGTTACCTACATGGAATGAGACATTTGAGTTCCCTCTTACTGTTCCAGAGTTGGCCTTGCTTCGCATAGAAGTTCACGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCATACCTATCCGGGAGCTACGAAGTGGCATTCGAGCAATTCCACTGTATAGCCAAAAGGGAGAGAAATACGCCTCTGTAAAGCTTCTCATGCGCTTTGAGTTCATTGATTGA 1800 0.4367 MSKQTYSVCFCWRRRFKLALAEAPSEIKTLFEDYAENEIMTPSHLKRFLVEVQKQEKATEEEAQVIIDSFRHFHRRSVGLNLESFFKYLFSDDNPPLIPSRGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNATKDNIDVLHGRTLTAPVELIRCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMVTNTFGDILFTPNTESVKEFPSPESLKRRIIISTKPPKEYLEAKEKDKGDDSQQLKEKGDVSLRRKGSSEDEAWGKEVPSLKGGTIEDYKDNNEDEDLNDEEEFDESDKLPNNNEAPEYRRLIAIHAGKPKGGLEECLKVDPDKVRRLSLSEQQLEKAAINHGKQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGHGRSLWLMQGMFRANGGCGYVKKPEFLLETGPDNEVFDPKAKLPVKTILKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVSSDTVMKKTRAIEDNWLPTWNETFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCIPIRELRSGIRAIPLYSQKGEKYASVKLLMRFEFID* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2317 599 Gene3D C2 domain 465 599 IPR035892 -
Pvu8g2317 599 MobiDBLite consensus disorder prediction 304 322 - -
Pvu8g2317 599 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 598 - -
Pvu8g2317 599 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 363 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2317 599 SMART plcy_3 333 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2317 599 SMART C2_3c 470 578 IPR000008 -
Pvu8g2317 599 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 93 IPR015359 -
Pvu8g2317 599 ProSiteProfiles C2 domain profile. 451 580 IPR000008 -
Pvu8g2317 599 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Pvu8g2317 599 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Pvu8g2317 599 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Pvu8g2317 599 PRINTS Phospholipase C signature 388 409 IPR001192 GO:0035556
Pvu8g2317 599 PRINTS Phospholipase C signature 409 427 IPR001192 GO:0035556
Pvu8g2317 599 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Pvu8g2317 599 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 598 IPR035892 -
Pvu8g2317 599 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 598 IPR001192 GO:0035556
Pvu8g2317 599 MobiDBLite consensus disorder prediction 254 330 - -
Pvu8g2317 599 SUPERFAMILY PLC-like phosphodiesterases 105 451 IPR017946 GO:0006629|GO:0008081
Pvu8g2317 599 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Pvu8g2317 599 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2317 599 SMART plcx_3 105 249 IPR000909 -
Pvu8g2317 599 Pfam C2 domain 471 572 IPR000008 -
Pvu8g2317 599 Gene3D - 21 100 - -
Pvu8g2317 599 CDD C2_PLC_like 468 597 - -
Pvu8g2317 599 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Pvu8g2317 599 SUPERFAMILY EF-hand 16 106 IPR011992 -
Pvu8g2317 599 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 463 IPR017946 GO:0006629|GO:0008081
Pvu8g2317 599 MobiDBLite consensus disorder prediction 254 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2317 Pvu-Chr8 53746620 53752061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2317 1 598 Acyl Lipid Metabolism Gene Families AT3G55940 67.110 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2317 K05857 - gmx:100037460 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2515 1 50275158 50280462 Pvu8g2317 8 53746620 53752061 ECH
Pvu8g2698 8 57384500 57393191 Pvu8g2317 8 53746620 53752061 ECH
Pvu8g2317 8 53746620 53752061 Pvu8g2317 8 53746620 53752061 ECH
Pvu1g2515 1 50275158 50280462 Pvu8g2317 8 53746620 53752061 PCT