Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2596 ATGACAAAAAGGAAGAACATTTCACCACCATTTTCTTCCACTCCAATTCCTCAAATCCATCACTCTTTCTCTCATTCTTATTGCAAAAGCAAAGAAGAAGAACTGAATCATTTTACATACTCTCAACATTCTCCGGAGCTGGCAAACTCGAGTTCACAGAAAGCATGGCTACACGATCAAGAAGATCGCAACAAGAAAACCGTAACAGACTTATACAAAGCCATAACCTCAAAGGACACCAACACAATGTACCGTCTTCTGGCCCCAGACTTGGAGTGGTGGTTCCACGGCCCACCCTCCCACCGCCACCACCTCATTCCTCTCCTCACTGCCACCGCCACCTCCTCCCCCTCCAAGCCTGTGCTGGTTCCTGACCACATCGTTGGGTTCGGATCAGTGACCATCGCTGAAGGGTTCGACGAGACCAACTTGGTGTGGTGGGTGCACGCGTGGACCACCACCGCTGACGGCGTCATCACGGAGGTTCGGGAGTACGTCAACACCTCCGTCACTGTCACCAGGCTCGGCTTCCATGGCTCCGACGATGTGGTTGCTTCTGCCATGTGTCAAAGCGTCTGGCAGAGCACGCTGTGCGATGAGTCTGTTCCAGGTCTCATTCTCGCCATCTAG 630 0.5238 MTKRKNISPPFSSTPIPQIHHSFSHSYCKSKEEELNHFTYSQHSPELANSSSQKAWLHDQEDRNKKTVTDLYKAITSKDTNTMYRLLAPDLEWWFHGPPSHRHHLIPLLTATATSSPSKPVLVPDHIVGFGSVTIAEGFDETNLVWWVHAWTTTADGVITEVREYVNTSVTVTRLGFHGSDDVVASAMCQSVWQSTLCDESVPGLILAI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2596 209 SUPERFAMILY NTF2-like 62 173 IPR032710 -
Pvu8g2596 209 Gene3D - 35 178 - -
Pvu8g2596 209 Pfam Wound-induced protein WI12 108 209 IPR009798 -
Pvu8g2596 209 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 50 209 - -
Pvu8g2596 209 PANTHER OS07G0691300 PROTEIN 50 209 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2596 Pvu-Chr8 56568613 56571016 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2596 - - var:108336652 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2596 8 56568613 56571016 Pvu8g2596 8 56568613 56571016 ECH
Pvu8g2596 8 56568613 56571016 Pvu1g2560 1 50628833 50630160 ECH