Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g2560 | ATGCGCATGCTCACCGGCGATTCCACCGCCGAAACCTTCCGATTCGTTCCGCAATCCGTTGCCGCCTTCGGCTCCACCGTCATCGTCGAGGGCTGCGACACCGCCCGCAACATTGCCTGGGTTCACGCCTGGACCGTCGCGGATGGGATAATCACTCAGGTGAGAGAGTACTTCAACACTGCCCTCACCGTCACCCGCTTCGAAGACTCCGGCGAGATTGTTCCCGCGAGCTCCGGCGCCGGCCGCTTCCCCTGCGTGTGGGAGAGCAGCGTATCGGGTCGGGTCGGGAAATCCGTGCCCGGTTTGGTTCTGGCAATATAA | 321 | 0.6262 | MRMLTGDSTAETFRFVPQSVAAFGSTVIVEGCDTARNIAWVHAWTVADGIITQVREYFNTALTVTRFEDSGEIVPASSGAGRFPCVWESSVSGRVGKSVPGLVLAI* | 107 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g2560 | 106 | SUPERFAMILY | NTF2-like | 3 | 63 | IPR032710 | - | |
| Pvu1g2560 | 106 | Gene3D | - | 1 | 70 | - | - | |
| Pvu1g2560 | 106 | PIRSF | Wun1 | 1 | 106 | IPR016533 | - | |
| Pvu1g2560 | 106 | PANTHER | SENESCENCE ASSOCIATED GENE 20 | 1 | 106 | - | - | |
| Pvu1g2560 | 106 | Pfam | Wound-induced protein WI12 | 1 | 106 | IPR009798 | - | |
| Pvu1g2560 | 106 | PANTHER | OS07G0691300 PROTEIN | 1 | 106 | IPR009798 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g2560 | Pvu-Chr1 | 50628833 | 50630160 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu1g2560 | - | - | gmx:100778637 | 192.2 |
Event-related genes