Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2513 ATGGCTGCAGACCCTCAGAAAATTCACCCTGTCCATGATGTTGAGGCACCAAACCAGCCTTCAGCACCCTTGGTGCCAAGAAGCATGTCTAAATCTGATGCAGGTGATCCAGAGAGAGGAGTGCAACAACAACAACAACATCCTCCACAGCACACCATTCCTGTGATGCATTCAAGGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTGATAAGCATATTGCTGATTCTGATTGTGGCCATTGCCATCACAGTTGGGATATTATACCTTGTGTTCAGACCAAAGGTTCCAAAGTACTCAGTGGATGAGCTCAGAGTCACACAGTTTGATACCTCTGACAACAACAGTTTATCTGCCACTTTCAACTTGACAATCACTGCCAGAAACCCTAACAAGAAGATTGGAATATACTATGAAGGTGGCAGCCACATAAGTTCTTGGTACGAGGACACAAAACTATGTGAAGGGTCTTTACCAAAGTTCTACCAAGGTCACCGCAACACCACAGTGCTTAGCATCCCTCTCACTGGCCAAACACAAGATGCTACTGGCCTGCAAAGTAGCCTTCAGCAGCAGCTGCAGGAAACTGGAAATGTGCCCCTCAATTTGAAGGTGAACCAGCCTGTGAGGATCAAGCTTGGGAAGTTGAAACTGTTCACAATCAAGTTCAGGATTAGGTGCAACATTGTGGTGGACAACCTTACTGCTAATAGTTCTATTAGAATTCAGAGCAGTAGTTGTAAATTCAGGTTTAGGCTGTGA 777 0.453 MAADPQKIHPVHDVEAPNQPSAPLVPRSMSKSDAGDPERGVQQQQQHPPQHTIPVMHSRPPKKRRSCCCRFFCWLISILLILIVAIAITVGILYLVFRPKVPKYSVDELRVTQFDTSDNNSLSATFNLTITARNPNKKIGIYYEGGSHISSWYEDTKLCEGSLPKFYQGHRNTTVLSIPLTGQTQDATGLQSSLQQQLQETGNVPLNLKVNQPVRIKLGKLKLFTIKFRIRCNIVVDNLTANSSIRIQSSSCKFRFRL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2513 258 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 19 256 - -
Pvu8g2513 258 Gene3D - 95 240 - -
Pvu8g2513 258 MobiDBLite consensus disorder prediction 37 52 - -
Pvu8g2513 258 Pfam Late embryogenesis abundant protein 129 233 IPR004864 -
Pvu8g2513 258 SUPERFAMILY LEA14-like 91 216 - -
Pvu8g2513 258 MobiDBLite consensus disorder prediction 1 61 - -
Pvu8g2513 258 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2513 Pvu-Chr8 55709082 55709858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2513 48 249 EF-hand Containing Proteins AT5G21130 31.707 1.22e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2513 - - gmx:100782663 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2513 8 55709082 55709858 Pvu8g2513 8 55709082 55709858 ECH
Pvu6g0874 6 20243196 20244188 Pvu8g2513 8 55709082 55709858 PCT