Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0874 ATGATGGCAGAACACCAAAGAATTCATCCTGTTCATGATGTGGAGGCACCACACAGACCTTTGGTGCCTGGAAACAGTTATAAATCTGATAGGGTTTTTCCTAAACGGACCTTTCCTGCGATGCATTCCAAGCCACCAAAGAGAAGAAGCTGTTGCTGCAGGTTTTTGTGTTGGACACTTAGCATATTGCTGATTTTGATCGTTGCTATTGGCATCACAGTAGGGATCATATACCTTGTGTTTAGGCCAAAGCTGCCCAAATACTCAGTGGACCAACTGAGGATAAGCCAGTTCAGTGTTTCTGACAGCAACACTCTCTCAGCAACCTTCAATGTGGCGATCACTGCAACAAATCCAAACAAGAAGATTGGGATATACTATGAGGGTGGAAGCCACATAAGTGCTTTGTACATGGACACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGTCACAGGAACACCACAGTGCTTGATCTGTCTCTAACAGGTGAAGCACAAGATGCAAGTGCCCTAATGAGTAGAATTCAGGAGCAGCTGCAACAGACCAACAATATTCCCCTTGATCTTAAGGTTAATCAACCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAATCAAGTTCAGGGTTAGGTGCAAGCTTTTGGTGGATAATCTTGGTGCTAATAATGATATTAGCATTTCAAGCAGTGATTGTAAGTTCAGGTTTAGGCTATGA 729 0.4335 MMAEHQRIHPVHDVEAPHRPLVPGNSYKSDRVFPKRTFPAMHSKPPKRRSCCCRFLCWTLSILLILIVAIGITVGIIYLVFRPKLPKYSVDQLRISQFSVSDSNTLSATFNVAITATNPNKKIGIYYEGGSHISALYMDTQLCEGSLPKFYQGHRNTTVLDLSLTGEAQDASALMSRIQEQLQQTNNIPLDLKVNQPVRVKLGKLKLFKIKFRVRCKLLVDNLGANNDISISSSDCKFRFRL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0874 242 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 43 240 - -
Pvu6g0874 242 Pfam Late embryogenesis abundant protein 114 216 IPR004864 -
Pvu6g0874 242 Coils Coil 168 188 - -
Pvu6g0874 242 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 43 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0874 Pvu-Chr6 20243196 20244188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0874 49 242 EF-hand Containing Proteins AT5G21130 28.866 6.53e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0874 - - gmx:100789322 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0874 6 20243196 20244188 Pvu6g0874 6 20243196 20244188 ECH
Pvu6g0874 6 20243196 20244188 Pvu8g2513 8 55709082 55709858 PCT