Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2362 ATGGAGGCTTTATGCAACAAGGGTGAAAATTTTCAGAAGAAAAAAGACGGGTTTCCTTCTTCTGCCAGTGTTTCAGCTCAAGAACTCAAAGGGTGTGCTTCTCCTCCTCTTGGTTGGCCTATTCGGAAGGCTGCACTCTCCAAATGCCGCAAATCAGATGAGAAAGAAAATGAACCTGTTTCTCTCTTGGAAGATAAAAAATTTACCAGCATCAGTTCTAAAATGCCAGGAATCGATGCAATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGGAAAGGAGTCTGCAGTGCTTTGGCCATCTCAAATGCCGTTACAAATCTTTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAGACATTTCCAGATGGAAGTAAGCTAGAGGTAATGACTTGCAGACCAAGGTCAGACCTTTTTATGAATCTTCCAGCTCTGCGCAAACTCGACAACATGCTTCTTGAAATTTTAGATAGTTGCAAAGATATGGAGTTTTGGTATGTTGACCAAGGAATTGTAGCCCAAGATGCAGAGGGTTCAGCTTCATTTTGCAAAAGAATTCAGCGACAAGAGGATAAGTGGTGGCTCCCTGTACCTCGTGTGCCCCCTGCCGGCCTCAGTGAGAACTCGAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGTCAAATTCTAAAAGCTGCCATGGCTATCAACAACGGTGCTTTAGCTGAAATGGCAGTTCCTGAGTCATACTTGGAAACCCTTCCCAAGAATGGAAGAACTTGTTTGGGGGATTTTATTTACCATTACATTACATCAGAGAAATTCTCTCCAGAGTGTCTTCTTGACTGCCTAGACCTATCCTCCGAGCATGTGGCACTTGAGATTGCAAACCGTGTTGAAGCCTCAATGTATGTGTGGCGTAGAAGAGCTAACTCTAAACCCCCACCTAATCCTAACCGTTCAACTACAAAGTCATCGTGGGAAATTGTGAAGGACTTCATGGCTGACGGAGATAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTCCTACTTTCACTGAAGCAGAAATTTCCTGGTCTAACTCAAACTACCTTGGATACCAGCAAGATTCAGTGCAACAAGGATGTTGGAAAATCCATACTAGAGAGTTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGCATAGACGATCTGCTGTATGTGGATGACTTGACTAAACATTCAGATAGGTTTCCATTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCACAAAGCAGTTGGCACACCAAGCTTTTCAGTGGCACCACCACTAATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTCAACAACAACATTAACATTGACAATAACAATAAGAACATCAAACCTCAACGTCGAGGCTTTGGGGTGAGAAGAGTACTGTCAAATTATCTTGGTGCAGAATCAAAAGAAACAAAGAGTTTTAGCAATCCAGGTGTGTTGAATGGTTCAAACCCAAGCAGCAACAAAGCAGAAAAGAAGGCACATGCCATGAATGAGAAGACAAAATGA 1638 0.428 MEALCNKGENFQKKKDGFPSSASVSAQELKGCASPPLGWPIRKAALSKCRKSDEKENEPVSLLEDKKFTSISSKMPGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAVTNLCATVFGQLWRLEPMEWLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDSCKDMEFWYVDQGIVAQDAEGSASFCKRIQRQEDKWWLPVPRVPPAGLSENSRKQLNHTRECASQILKAAMAINNGALAEMAVPESYLETLPKNGRTCLGDFIYHYITSEKFSPECLLDCLDLSSEHVALEIANRVEASMYVWRRRANSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQKFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAVGTPSFSVAPPLISPARGERSPFLNNNINIDNNNKNIKPQRRGFGVRRVLSNYLGAESKETKSFSNPGVLNGSNPSSNKAEKKAHAMNEKTK* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2362 545 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 18 520 - -
Pvu8g2362 545 Gene3D PRONE domain, subdomain 1 296 437 - -
Pvu8g2362 545 Gene3D PRONE domain, subdomain 1 71 295 - -
Pvu8g2362 545 MobiDBLite consensus disorder prediction 1 22 - -
Pvu8g2362 545 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 78 432 IPR005512 GO:0005085
Pvu8g2362 545 ProSiteProfiles PRONE domain profile. 68 438 IPR005512 GO:0005085
Pvu8g2362 545 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 18 520 IPR038937 GO:0005085
Pvu8g2362 545 MobiDBLite consensus disorder prediction 513 534 - -
Pvu8g2362 545 MobiDBLite consensus disorder prediction 513 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2362 Pvu-Chr8 54198257 54201645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2362 - - vun:114193182 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2467 1 49882567 49886130 Pvu8g2362 8 54198257 54201645 ECH
Pvu8g2362 8 54198257 54201645 Pvu8g2362 8 54198257 54201645 ECH
Pvu1g2467 1 49882567 49886130 Pvu8g2362 8 54198257 54201645 PCT