Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2467 ATGGATGCTTTTTCCAACAAGAACCAAACTTCTCAAAACAAAACAGATGGGGTTTCCTCTTGTCTCACGGATTCCACTGCAGACTCCAGGGAAACCAGTTTCTGTGGATCCACTTCTTCAGTTTCCGTTGAAGAAGCAAAGGCAAAAGGCTCTTCTTCACCCCCTCCTCTTGGTTGGCCCATTCTCAAGGCTACAGTCTCCAAGCGCTCCAACTCTCATGAAAAGGAAAACAAGCTTAAATCACGCTCGGAAGACACTAAGCTTACTCGGATTGGTTTGAACCTGTCGGAAGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCAATCTCTAATGCCATTACTAATCTGTGTGCAACTGTATTTGGGCAATTATGGAGACTAGAACCTCTACCTTCTGAGAAGAAAGAAATGTGGAAGAGAGAGGTGGAGTGGCTTGTTAGTGTTAGCGATTACATTGTTGAATTGATGCCTTCTTGGCAAACATTTCCCGATGGGAGTAAACTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTTTATGAACCTTCCAGCTCTTCGCAAACTTGACAACATGCTTCTCGAAATTTTGGACAGTTTCACTGCTACAGAGTTCTGGTATGTAGACCAAGGAATTGTAGCCGCAGAAGCAGATGGTTCAGCCTCTTTTCGCAAAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCCGTACCTCGTGTCCCCCCTGCAGGACTCAGTGAAGACTCAAGGAAACACTTGAATTACTCTCGAGAATGTGCAAACCAAATACTGAAAGCAGCCATGGCTATCAACAACATTGCTTTGGCTGAAATGGAAGTTCCCGAGTCATATTTGGAAGTTCTTCCCAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAGTTCTCCCAAGAGTACCTTCTTGATTGCTTAGACATATCGTCTGAACATGTTGCATTAGAGATTGCAAACCGTGTGGAAGCAGCAATTTATGTGTGGCGCCGAAGAGTTCACTCTCGGTTCTCACCATCACCAAGGCCCAACCGTTCTACCACAAAATCATCATGGGAAATGGTCAAGGACTTCATGCTTGATGGAGACAAGAGAGAATTGCTAGCAGATAGAGCTGAAAACATTCTAGTTTCCCTGAGGCAACGGTTCCCAGGCTTAACTCAAACCACCCTTGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCGTGCTAGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGTATAGATGATTTGCTATATGTGGATGACTTGACCAAACATTCAGAGAGGTTTGCATTGGTTCCTACTACTGCTACAGCTAACGTGGTTTCTCAGCAGAAGAAGGTTACACGTCCACACTCGGTGTCTGTCTCAGGCACTGTTACTCCGCACAAAGCAGCAGTTGGCACGCCAAGCTTTTCACCAGCTTCTGTGCCACTCATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCCATAACAACAACATCATCAAACCTCAACGTCGTGGCTTTGGGGTGAGGAGAGTGCTGTCAAATTATCTTGGAGTAGAGACAAAGACCACTAAGATATGCAGCAACTCAACTGAGGTGAAATGTTCGAACCCAAGTAGCAAGAAAACTGAACAACAACGTGAGAGAAACAAAACCAAATGA 1776 0.4482 MDAFSNKNQTSQNKTDGVSSCLTDSTADSRETSFCGSTSSVSVEEAKAKGSSSPPPLGWPILKATVSKRSNSHEKENKLKSRSEDTKLTRIGLNLSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWKREVEWLVSVSDYIVELMPSWQTFPDGSKLEVMTCRPRTDIFMNLPALRKLDNMLLEILDSFTATEFWYVDQGIVAAEADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKHLNYSRECANQILKAAMAINNIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSQEYLLDCLDISSEHVALEIANRVEAAIYVWRRRVHSRFSPSPRPNRSTTKSSWEMVKDFMLDGDKRELLADRAENILVSLRQRFPGLTQTTLDTSKIQCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTTATANVVSQQKKVTRPHSVSVSGTVTPHKAAVGTPSFSPASVPLISPARGERTPFLHNNNIIKPQRRGFGVRRVLSNYLGVETKTTKICSNSTEVKCSNPSSKKTEQQRERNKTK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2467 591 MobiDBLite consensus disorder prediction 569 591 - -
Pvu1g2467 591 MobiDBLite consensus disorder prediction 1 47 - -
Pvu1g2467 591 ProSiteProfiles PRONE domain profile. 88 472 IPR005512 GO:0005085
Pvu1g2467 591 Gene3D PRONE domain, subdomain 1 92 331 - -
Pvu1g2467 591 Gene3D PRONE domain, subdomain 1 332 472 - -
Pvu1g2467 591 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 466 IPR005512 GO:0005085
Pvu1g2467 591 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 16 568 IPR038937 GO:0005085
Pvu1g2467 591 MobiDBLite consensus disorder prediction 1 61 - -
Pvu1g2467 591 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 16 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2467 Pvu-Chr1 49882567 49886130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2467 - - gmx:100796692 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2467 1 49882567 49886130 Pvu1g2467 1 49882567 49886130 ECH
Pvu1g2467 1 49882567 49886130 Pvu8g2362 8 54198257 54201645 ECH
Pvu1g2467 1 49882567 49886130 Pvu8g2362 8 54198257 54201645 PCT