Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2350 ATGAAGGGTGGCAGCCGTTTCTTCACAATAGCTCTGGTCTCCGCCTGGTACTCCTCCAACATTGGGGTTTTACTCCTCAACAAGTACCTTCTTAGCAACTATGGCTTCAAGTACCCTATATTCCTCACCATGTGCCACATGACTGCCTGCTCCCTCTTCAGCTACGTCGCCATCGCCTGGCTCAAGCTCGTTCCTATGCAGACCCTACGCTCCCGCCTCCAGTTCTTCAAGATCGCCGCCCTCAGCCTCGTCTTCTGCGTCTCCGTCGTCTTCGGCAACATCTCCCTCCGCTACCTCCCCGTCTCCTTCAACCAGGCCGTCGGCGCCACCACCCCCTTCTTCACCGCCGTCTTCGCCTATCTCATCACCTTCAAGAGAGAGGCCTGGCTCACCTACCTCACCCTCGTCCCCGTTGTCGCCGGCGTCGTCATTGCCAGCGGGGGTGAACCAAGCTTCCATTTATTTGGGTTCATAGTATGTGTTGCAGCTACTGCTGCACGAGCCTTAAAATCCGTGTTGCAAGGAATTTTACTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTTCTTTATATGGCTCCAATTGCTGTTGTTTTCCTTCTCCCTGCTACACTAATGATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCTTATCTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTTGTAATTTCAATTCTGATATTTAGAAACCCAGTGTCTGTCACTGGAATGATGGGTTATTCATTCACAGTCCTTGGAGTTGTACTTTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 921 0.4919 MKGGSRFFTIALVSAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKLVPMQTLRSRLQFFKIAALSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLITFKREAWLTYLTLVPVVAGVVIASGGEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLMMEENVVGITLALARDDVKIIWYLLFNSALAYLVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMMGYSFTVLGVVLYSEAKKRSK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2350 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 300 - -
Pvu8g2350 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 148 - -
Pvu8g2350 306 PANTHER SOLUTE CARRIER FAMILY 35 4 305 - -
Pvu8g2350 306 Pfam Triose-phosphate Transporter family 11 299 IPR004853 -
Pvu8g2350 306 PANTHER - 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2350 Pvu-Chr8 54059446 54063323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2350 1 306 Organic Solute Cotransporters AT3G11320 89.216 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2350 - - gmx:100806704 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2477 1 49971690 49980001 Pvu8g2350 8 54059446 54063323 ECH
Pvu6g1437 6 25208269 25210815 Pvu8g2350 8 54059446 54063323 ECH
Pvu8g2350 8 54059446 54063323 Pvu8g2350 8 54059446 54063323 ECH
Pvu1g2477 1 49971690 49980001 Pvu8g2350 8 54059446 54063323 PCT