Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2477 ATGGCTCAAATTGCTCTTATTGCTCCACCAACTTTCAGAGCTATTACCACTGGTGGGGGAAAACAGCAACAACATGAACTCTCATATTCAAGAAAGAGAGTGAGTTTAGCATCAGTTGTTCCAAGTAGGAAGATGAAGAAGGTTCCATTGTTTGTTTCATCAAATTGTGGTGGTGAAAGGAGTAGAAGTGTGGTGGTGAAAGTTTCAGGAGGAGGAACCATCTCTCTCCCTCATGGTTGGCCACCACAAAAGGGCTCTGAAGATCAAATCGAAAGCATCAACAGAATGAAGGGTTCTAACCGGTTCTTCACTATAGGGCTGGTGGCGGCGTGGTACTCCTCCAACATTGGCGTGCTTCTCTTGAATAAGTATTTGCTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACGGCGTGTTCCTTGCTCAGTTACGTCGCCATCGCGTGGATGAAGGTGGTGCCCTTGCAAACCATTCGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTCTCAGTCTAGTTTTCTGTGTCTCCGTTGTGTTTGGGAACATTTCTCTGCGCTACCTCCCCGTGTCTTTTAACCAGGCTGTTGGCGCCACCACGCCCTTCTTCACTGCCGTTTTTGCTTACCTTATAACTTTTAAGAGGGAGGCTTGGCTCACTTACCTCACCCTTGTTCCTGTTGTTACTGGAGTCATCATTGCCAGTGGGGGGGAACCTAGTTTCCATCTGTTTGGATTTATTATATGTGTTGCGGCTACTGGTGCAAGGGCTCTGAAATCAGTGCTGCAAGGGATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTTTGCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCAACACTTATAATGGAAGAGAATGTGGTTGGCATCACGTTGGCTCTTGCCAGGGATGATACCAAGATCATTTGGTATCTGCTGTTTAATTCGGCACTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACAAAACATACCAGTGCTCTGACCCTTCAGGTACTAGGAAATGCTAAAGGTGCTGTAGCAGTAGTAGTTTCAATCCTAATCTTCAGAAACCCAGTTTCGGTCACTGGAATGATGGGTTACTCACTCACAGTCTTTGGAGTTATACTCTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 1206 0.4577 MAQIALIAPPTFRAITTGGGKQQQHELSYSRKRVSLASVVPSRKMKKVPLFVSSNCGGERSRSVVVKVSGGGTISLPHGWPPQKGSEDQIESINRMKGSNRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKVVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLITFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATGARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDTKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVFGVILYSEAKKRSK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2477 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 395 - -
Pvu1g2477 401 PANTHER SOLUTE CARRIER FAMILY 35 40 400 - -
Pvu1g2477 401 Pfam Triose-phosphate Transporter family 107 394 IPR004853 -
Pvu1g2477 401 PANTHER - 40 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2477 Pvu-Chr1 49971690 49980001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2477 95 401 Organic Solute Cotransporters AT3G11320 91.205 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2477 - - vra:106757848 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2477 1 49971690 49980001 Pvu8g2350 8 54059446 54063323 ECH
Pvu1g2477 1 49971690 49980001 Pvu1g2477 1 49971690 49980001 ECH
Pvu6g1437 6 25208269 25210815 Pvu1g2477 1 49971690 49980001 ECH
Pvu1g2477 1 49971690 49980001 Pvu6g1437 6 25208269 25210815 ECH
Pvu1g2477 1 49971690 49980001 Pvu8g2350 8 54059446 54063323 PCT