Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2332 ATGGTTGATCTAGATTGGCAAACAAAGATGGTGTGTTCAAACATGTCTCCCAACTCCACCAAACTCTCCCTCTTCCCAAACAACATCCCAATCCCCACTTTGCAAATCCCTCTTCTCCAAAACGACATCACCGCTGCCTCCTCCCCGCTCTGTGCTGCCTACGACAACTACCTTCGCCTCCCCGACCTCAGAAATCTTTGGGCCTCTAACCACTTCCCCGATTGGCCCAACTACCCAATCATAAAGCCCGCCTTACACGCCCTCGAAATCACCTTCCGATTTCTCGCAACCGTTTTATCGGACCCGAGGCCCTACGTTAACAAGCGCGACTGGGCCCGACGCCTCGAGTCTCTCGCCTCCGCGCAGGTCCAGATCATTGCCATGCTCTGCGAAGACGAGGAGCAAAACCCAGAGACACGTGGCAAGGCGCCTGTCTGTGACGTCAACGACTTCGTCACCGCTCAAAGAAGAAGCTACAGCGAGGAGAGCTTTCTCCCGCGTCTCGCCACGTGGCACAGGTCCCGGGATGTGGCGAGGAGGATCCTGGCCACCGTGGAATGCGAGATGACGAGATGCACCTACACGCTGGGCCTGGGAGAGGCCAACCTCGCGGGAAAGAAGGTTCTCCGTTACGACGCCGTTTGCAGGCCGACCGAGATCCCGTCTCTGGATCCGACGCCGTTTGATCACGTGGAGAACTACGAGAACAGGACCCTGCACGCGGCGCAGCAGATCGTGGAGTGCTGGACGCGTGTGGGGAGGAAGTTGGTGGAGAGATTGGTGGAGTCTGTGGAGAGGAGGGCGTTGGAGAAGGCGGCGAGTGAGTGCCACGCGGTGGAGCGGATCTGGAAGCTTCTGGCGGAGGTTGAGGACGTGCATGTGATGATGGATCCGGAGGATTTTCTTCGGCTGAAGAAGGAGTTGGGGATGAGAAGGCAAGGCGAAACGGTGGCGTTTTGCTTTAGGTCGAAGGAGGTTGTGGAGTTGGCGAGGGTATGTAGGGATCTGAGGCAGAAGGTGCCGGAGATATTGGAAGTGGAGGTTGATCCGAAGGGTGGGCCCGGGATGATGGAGGCGGCCATGAAGGTGTACGCGGAGAAAACGAAGGGGTCGGAGAAGGTTGTTGTTTTGCAGGGTATGCAAGCGGTTGAGGTGGCGATGAAGAGGTTCTTCTTCGCGTACAAGCAGGTTGCGACGCTTCTGATGGGAAGCTCCGAGGCCGATGGATTAACTCAGATATTCCTTCAACCCACATACTTCCCTAGCTTGGATGCTGCCAAGACATTTCTTGGTTATTACTGGGAAAATAACAACAATAACCAAAACCAAAATTTGGTAGTTCCATGGTAG 1350 0.5578 MVDLDWQTKMVCSNMSPNSTKLSLFPNNIPIPTLQIPLLQNDITAASSPLCAAYDNYLRLPDLRNLWASNHFPDWPNYPIIKPALHALEITFRFLATVLSDPRPYVNKRDWARRLESLASAQVQIIAMLCEDEEQNPETRGKAPVCDVNDFVTAQRRSYSEESFLPRLATWHRSRDVARRILATVECEMTRCTYTLGLGEANLAGKKVLRYDAVCRPTEIPSLDPTPFDHVENYENRTLHAAQQIVECWTRVGRKLVERLVESVERRALEKAASECHAVERIWKLLAEVEDVHVMMDPEDFLRLKKELGMRRQGETVAFCFRSKEVVELARVCRDLRQKVPEILEVEVDPKGGPGMMEAAMKVYAEKTKGSEKVVVLQGMQAVEVAMKRFFFAYKQVATLLMGSSEADGLTQIFLQPTYFPSLDAAKTFLGYYWENNNNNQNQNLVVPW* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2332 449 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 442 IPR038759 -
Pvu8g2332 449 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 215 430 IPR037217 GO:0019441|GO:0020037|GO:0046872
Pvu8g2332 449 Gene3D - 222 312 - -
Pvu8g2332 449 Pfam Hs1pro-1 protein C-terminus 189 436 IPR009743 -
Pvu8g2332 449 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 442 - -
Pvu8g2332 449 Pfam Hs1pro-1 N-terminus 1 186 IPR009869 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2332 Pvu-Chr8 53879262 53881476 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2332 - - gmx:100778560 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2332 8 53879262 53881476 Pvu8g2332 8 53879262 53881476 ECH
Pvu1g2495 1 50105127 50107243 Pvu8g2332 8 53879262 53881476 PCT