Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2495 ATGCCCCCAACATTCCCAGTCCACACGTCTTTCAAATTTCACAACTCCATCACTCCTCTCCTTCCTTCCATATATATACCCTTCAATCTTCCTTCCCCGTTTCAATTCCTCATCACAACACAACAACAACAACACAAAACTCCCAAAATGGTTGATTTACATTGGAAATCAAAGATGCCCGCTTCCGACATGTCTTCCAAATCTCCAAAACTCTCGCTCTCCGCCAACTCCTTACCCTCTTTGCACCTTCCCTTCCGCACCACAGACATATCTCCCGCTGCACCTTCACTCTGTGCTGCATACGATTACTATCTCTCTCTTCCACAACTCAGAGCCCTTTGGAATTCAATAGACTTTCCCAATTGGACCAACGAACCAATTTTGAAACCTGCCTTGCATGCTTTGGAAGTCACTTTCCGTTTTCTTTCCATTGCTTTCTCCGATACCAGGCCTCATTCCAACCGAAGAGAATGGAAACGTACCATAGAGTCCCTCGCTGTTCATCAGATAGAGATCATAGCCATGCTGTGCGAAGACGAGGAGTACAATTCTCAGACACGTGGCGCCGTCCCAACCGCTGATCTCACTCTAGATACCACCAACAGAAGCTACAGCGAGGCCAGTCTTCTTCCGCGGCTTGCCACGTGGTACAAATCCAAGGACGTGGCGCAGAGGATTCTTCTCACCGTGGAATGCCAAATGAGGAGGTGTAGCTACACCCTAGGGTTGGGAGAGTCGAACCAGGCGGGGAAACCGAGCCTGCTCTACGATCGCGTCTGCAAACCAAATGAAATCCACGCGCTCAAGACCACGCCTTACGACGAGCGCGTGGAGAACCACGAGAACCACGCGGTGCATGCCACGCTCCAGATCGCGGAGTCCTGGATCCACGCGTCGCGGAAGCTTCTTGAGAGGATCGGCGATGCTATCGTCTCCAGGAGGTTGGAGCAGGCGGCGCAGGACTGCCACGCGGTGGAGCGCATCTGGAAGCTTCTCGCGGAGGTGGAGGATCTCCACCTGATGATGGATCCGGACGAATTCTTGCGTTTGAAGAACCAGCTCTCGGTGCGCTCGTCGAGCGGCGAAACGGCGTCTTTCTGCTTCAGATCGAAGGAATTGGTGGAACTGACGAAAATGTGCAGAGATCTGAGGCACAGGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGGATTCAAGAAGCGGCGATGAAACTGTACGTCTCGAAGATCGCGTTCGAGAAGGTTCACGTGTTGCAGGCGATGCAGGCGATTGAAGCGGCGATGAAGAGGTTCTTCTACGCGTATAAGCAAGTTTTGACGGTGGTGATGGGGAGTTCGGAGGCTAACGGCAACCGAGTTGGACTGAGTTGCGAGTCGGGTGACTCGTTGACTCAGTTATTCCTTGAACCGACGTACTTTCCAAGCTTGGATGCCGCCAAGACTTTCCTTGGTTACTTCTGGGATAATAGCGATAACAAGTGTTAG 1500 0.5233 MPPTFPVHTSFKFHNSITPLLPSIYIPFNLPSPFQFLITTQQQQHKTPKMVDLHWKSKMPASDMSSKSPKLSLSANSLPSLHLPFRTTDISPAAPSLCAAYDYYLSLPQLRALWNSIDFPNWTNEPILKPALHALEVTFRFLSIAFSDTRPHSNRREWKRTIESLAVHQIEIIAMLCEDEEYNSQTRGAVPTADLTLDTTNRSYSEASLLPRLATWYKSKDVAQRILLTVECQMRRCSYTLGLGESNQAGKPSLLYDRVCKPNEIHALKTTPYDERVENHENHAVHATLQIAESWIHASRKLLERIGDAIVSRRLEQAAQDCHAVERIWKLLAEVEDLHLMMDPDEFLRLKNQLSVRSSSGETASFCFRSKELVELTKMCRDLRHRVPEILEVEVDPKGGPRIQEAAMKLYVSKIAFEKVHVLQAMQAIEAAMKRFFYAYKQVLTVVMGSSEANGNRVGLSCESGDSLTQLFLEPTYFPSLDAAKTFLGYFWDNSDNKC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2495 499 Gene3D - 254 487 - -
Pvu1g2495 499 Pfam Hs1pro-1 N-terminus 50 231 IPR009869 GO:0006952
Pvu1g2495 499 Pfam Hs1pro-1 protein C-terminus 234 494 IPR009743 -
Pvu1g2495 499 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 50 498 IPR038759 -
Pvu1g2495 499 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 256 488 IPR037217 GO:0019441|GO:0020037|GO:0046872
Pvu1g2495 499 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 50 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2495 Pvu-Chr1 50105127 50107243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2495 - - gsj:114396435 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2495 1 50105127 50107243 Pvu1g2495 1 50105127 50107243 ECH
Pvu1g2495 1 50105127 50107243 Pvu8g2332 8 53879262 53881476 PCT