Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2330 ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTCAATGAAACTGTTGAGCGTGAAGAGAGAGAGGATGAGAAGGTGGGTGGTTCACATTCCAGTCTGAGAAGCTTTCTGTGGCATGGTGGATCTGTTTATGATGCATGGTTCAGCTGTGCTTCAAATCAGGTTGCGCAGGTTCTGCTAACACTGCCATACTCTTTCGCTCAGCTGGGAATGCTTTCTGGCATCATATTCCAAGTCTTCTACGGAATAATGGGAAGTTGGACTGCTTATTTGATTAGCATTCTGTACATCGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTACTAGGTCCATACTGGAAAGCCATTGGCTTGGCCTTTAATTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAATGACCACTTGGACAAGAGGACCTGGACTTACATATTCGGAGCATGCTGCGCGACAACAGTGTTTGTACCTTCATTTCACAACTACAGGATTTGGTCTTTCCTTGGTCTTGGCATGACCACGTACACAGCCTGGTACTTAACCATAGCAGCCATCGTTCATGGCCAGGTTGAAAATGTGACTCACACGGGCCCCAAAAAAATGGTTTTGTATTTCACGGGAGCCACCAACATTCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATATATCTATCTTTATGCGACTCTTTTTGTATTCACACTCACCCTACCATCTGCCATTGCCGTTTACTGGGCCTTTGGTGACCAACTCCTGGACCACTCCAATGCCTTCTCTCTTCTCCCCCGCTCTGGTTGGCGTGACACAGGTGTCATCTTAATGCTGATTCACCAGTTTATCACTTTTGGATTTGCTTGCACACCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCACTTGCAAGGTTGCCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGCCCTATTAACTCTGCTGTGGGAGCTCTTTTGGTTACCTTCACCGTCTATATCATCCCTGCTTCTGCCCATATGCTCACTTACAGGTCTGCTTCTGCAAGACAGAATGCTGCTGAGAAATTGCCCTTCTTCGTCCCAAGCTGGACGTTAATGTATGTGATCAATGCATTTGTGGTGGTGTGGGTTCTAGTGGTGGGATTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCATCAAACAGGTTGACACATTTGGACTCTTCGCCAAGTGCTACCAGTGTCCCCCGCACAAAACAGCAGCTTCCAACCAAACACTGCATCACTGA 1440 0.4562 MLPQKQGEETMMSSLNETVEREEREDEKVGGSHSSLRSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFAQLGMLSGIIFQVFYGIMGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLGMTTYTAWYLTIAAIVHGQVENVTHTGPKKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPASAHMLTYRSASARQNAAEKLPFFVPSWTLMYVINAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPHKTAASNQTLHH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2330 479 MobiDBLite consensus disorder prediction 15 30 - -
Pvu8g2330 479 MobiDBLite consensus disorder prediction 1 30 - -
Pvu8g2330 479 PANTHER AUXIN INFLUX TRANSPORTER 2 468 - -
Pvu8g2330 479 Coils Coil 5 25 - -
Pvu8g2330 479 PANTHER OS05G0424000 PROTEIN-RELATED 2 468 - -
Pvu8g2330 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2330 Pvu-Chr8 53847534 53852437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2330 22 465 Organic Solute Cotransporters AT2G21050 79.279 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2330 K13946 - gmx:100817572 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2497 1 50126351 50130393 Pvu8g2330 8 53847534 53852437 ECH
Pvu8g2330 8 53847534 53852437 Pvu8g2330 8 53847534 53852437 ECH
Pvu1g2497 1 50126351 50130393 Pvu8g2330 8 53847534 53852437 PCT