Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2497 ATGTCGCGCCAGAAGCAAGCTGAAGAAGCCATGGTGTCGAGCCTCACCCAAACGGTTGAGCGTGAAGAGGGAGAGGAAGTCAAAGGAGAGACGTCACATTTTAGCTTCAAAAATGCTCTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAGGTTCTGTTGACTCTGCCTTACTCTTTCTCACAGCTGGGGATGGTTTCAGGGATCATATTCCAAGTGTTGTATGGCTTGCTTGGGAGTTATACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTGTTGGAAGGCTTGCTGGGTCCATACTGGAAAGCCATTGGACTGGCCTTCAATTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTCATAGCTTGTGCCAGTAATATATACTACATAAATGACCACTTGGACAAGAGGACTTGGACCTACATATTTGGGGCATGTTGTGCCACCACAGTGTTCATTCCATCATTCCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACATACACTGCTTGGTATTTGACCATCGCAGCACTTGTTCATGGCAGGGTTGAGAATGTGACTCATTCGAGCCCAAAAAAGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATATATCTTTATGCTACATTTTATGTGTTCACCCTCACTCTACCCTCTGCTATTTCGGTTTACTGGGCCTTTGGTGACCAACTTTTGGATCACTCCAATGCCTTCTCACTTCTCCCACGCACTGGCTGGCGTGACGCTGGTGTCATCCTAATGCTCATTCACCAGTTCATAACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATCGGAATGCATGACACAAAGAGCATATGCTTGAGGGCTCTAGCCAGGTTGCCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGACCCATCAATTCAGCTGTTGGGGCCCTTTTGGTCAGCTTCACCGTTTACATCATTCCTGCTTCTGCTCATATGCTTACCTTCAGATCTGCCACTGCAAGACAGAATGCTGCAGAGAAATTGCCCTCCTTCATTCCAAACTGGACGGTGATGTATGTGGTGAATGCACTTGTGGTGGTGTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAACTTCATCAAACAGGTCGACACATTTGGGCTATTTGCCAAGTGCTACCAGTGTCCACCCAAACTCACTAACCACACCCTGCATCACTGA 1431 0.4682 MSRQKQAEEAMVSSLTQTVEREEGEEVKGETSHFSFKNALWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQVLYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGRVENVTHSSPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATFYVFTLTLPSAISVYWAFGDQLLDHSNAFSLLPRTGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFRSATARQNAAEKLPSFIPNWTVMYVVNALVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKLTNHTLHH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2497 476 PANTHER AUXIN INFLUX TRANSPORTER 3 467 - -
Pvu1g2497 476 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Pvu1g2497 476 PANTHER OS05G0424000 PROTEIN-RELATED 3 467 - -
Pvu1g2497 476 MobiDBLite consensus disorder prediction 1 26 - -
Pvu1g2497 476 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2497 Pvu-Chr1 50126351 50130393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2497 4 465 Organic Solute Cotransporters AT2G21050 75.974 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2497 K13946 - gmx:100795466 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2497 1 50126351 50130393 Pvu1g2497 1 50126351 50130393 ECH
Pvu1g2497 1 50126351 50130393 Pvu8g2330 8 53847534 53852437 ECH
Pvu1g2497 1 50126351 50130393 Pvu8g2330 8 53847534 53852437 PCT