LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g2325	ATGAATCGGAGCTTCATAGCGCCGGAATCCAAAATGCAAGACGCCTTCAAGCAGAGGCAACAGCAATTGGGGGCTCTCAGGTCCTCTGTGCGCGCCAAGGACAGGGACGACGAACTCGCGTTGTTCCTGGAAATGAGGAACCGCGAGAAGGAGCGTGGCGATCTCGTGCTTCGCGCCGCAGAGGATTTTGACGGTGCAGCCGCGTTGGGCTCAAATCTAGGCAATTCTCCCTTGTTTAACGTTCCGTCTTCCATGGCGGCGCTGGTGCGGAAGACTGGTGCTGATGATTTTCTCAATTCGGAGAATGATAAGAATGATTATGACTGGCTTCTAACCCCACCTGGGACTCCCCTTTTTCCTTCTTTGGAGATGGAATCAACAAAAACTGTTATGAGTCAGCTTGGGGCTCCAACTTTACGCCCCACATCATTAAAAGCTAGATTAGCAAATCCTCCGTCAGAACATACTGGAAGGAGCAACTTAGTATCTAAACAACCCGCCTCCGCCCCTGGGTTGACCTCTTCAGGTGGTGGAATCAGAAGGCCCTCATCAGCGGGGAATCTTTCAGAACTAGCTGGAAGAAGCAACTTAGTATCTAAACTACCAGCCTCTTCCCCGGGGTTGACTTCTTCAGTTGGGGGAACTAGGAGGTCCTCATCCTCAGGGAATCTGGGATCTAGATCTGCAACTCCTACTGGACGACCTACATTGACCACAGTTTCAAAATCATCTAGACCTTCAACACCGACTTCTCGGACAACCATACCATCAACTAGGGCTATGGTAGCAACTACCAAGACCTCAGTTTCCTCAGCCAAGCCCATGGTTTCTGCTACTAAGGCTGCAGTTTCTGTTGCTAGAACTACTACAGTACCTGCAGCTAAAACCACAATTCCATCTAGATCCTCTACACCTTTGTCAAGATCTACTACACCTTCAAGATCTACTACAAGATCTTCAACACCTACAACCAGAACTACCTTATCTGCATCGAGGCCTACTTCAAGGGCATCAACCCCAACTAGGCGGCCTACAACACCATCTAATGTATCTACTGTATCTTCTCTGTCAGTTAAGACTTCTTCAATCTCCAAGTCAGCTCCTGTGATGTCAAGGCAGCCAATAACATCGCCTGGCACTTCACCAAATGTGAAGCCAAGCCCAAGACCATGGAAGCCATCTGAGATGCCTGGCTTTTCACTTGATGCGCCACCCAATTTGAGGACAACGCTTCCAGAAAGGCCGCTGTCAACAACTAGGGGTAGGCCTGGAGCACCCGGTGCACGATCCTCTTCTGTTGAGCCTGCTTCTATTGGTAGACCAAGGCGGCAATCAAACTCTCCTTCAAGAGGACGTTCATCCAACGGCATTTCTCATCCAACTGGAAGCTCTATGCCAGCAGTTAATCGTGGGTACTCCAGAGCAAATGACAATGTCAGTCCTGTTGTAATGGGCACAAAAATGGTTGAGAGGGTAATAAATATGCGAAAATTGGCACCACCAAGGCTGGATGACAAGAACTCTTCCCATAATCTTTCTGGCAAGTCATCTTCTTCTCCAGATACCTCTGGTTTTGGAAGATCACTCTCGAAGAAATCCTTGGATATGGCAATTAGGCATATGGATATAAGGCGAAGGGTTCCAGGCAATTTACGGTCATCATTGATGACGAACATTCCAGCATCTTCAATGTATAGTGTGAGGTCTGGGCCTCCGCGTAGCCGAACTGTTAGTATCTCGGGTTCTCCTCATGCCACTAGCAGTAATGCTAGTTCTGAAGTGAGTGTAAACCCAAATGGTGTTTGTTTATATAATAGTGAAATAGACGATGATATTGGCAGTGAGAGAAGTGGTCAATCTCCTGCCAGTGTGCGGGGTAGGTAA	1884	0.4825	MNRSFIAPESKMQDAFKQRQQQLGALRSSVRAKDRDDELALFLEMRNREKERGDLVLRAAEDFDGAAALGSNLGNSPLFNVPSSMAALVRKTGADDFLNSENDKNDYDWLLTPPGTPLFPSLEMESTKTVMSQLGAPTLRPTSLKARLANPPSEHTGRSNLVSKQPASAPGLTSSGGGIRRPSSAGNLSELAGRSNLVSKLPASSPGLTSSVGGTRRSSSSGNLGSRSATPTGRPTLTTVSKSSRPSTPTSRTTIPSTRAMVATTKTSVSSAKPMVSATKAAVSVARTTTVPAAKTTIPSRSSTPLSRSTTPSRSTTRSSTPTTRTTLSASRPTSRASTPTRRPTTPSNVSTVSSLSVKTSSISKSAPVMSRQPITSPGTSPNVKPSPRPWKPSEMPGFSLDAPPNLRTTLPERPLSTTRGRPGAPGARSSSVEPASIGRPRRQSNSPSRGRSSNGISHPTGSSMPAVNRGYSRANDNVSPVVMGTKMVERVINMRKLAPPRLDDKNSSHNLSGKSSSSPDTSGFGRSLSKKSLDMAIRHMDIRRRVPGNLRSSLMTNIPASSMYSVRSGPPRSRTVSISGSPHATSSNASSEVSVNPNGVCLYNSEIDDDIGSERSGQSPASVRGR*	628

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g2325	627	PANTHER	PROTEIN, PUTATIVE-RELATED	1	188	-	-
	Pvu8g2325	627	PANTHER	PROTEIN, PUTATIVE-RELATED	191	221	-	-
	Pvu8g2325	627	PANTHER	PROTEIN, PUTATIVE-RELATED	221	627	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	562	602	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	293	479	-	-
	Pvu8g2325	627	Coils	Coil	624	627	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	293	380	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	506	528	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	147	277	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	498	528	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	153	277	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	437	479	-	-
	Pvu8g2325	627	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	191	221	-	-
	Pvu8g2325	627	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	221	627	-	-
	Pvu8g2325	627	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	1	188	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	562	627	-	-
	Pvu8g2325	627	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g2325	Pvu-Chr8	53809315	53814596	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g2325	-		-	vra:106765292	950.273

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g2500	1	50143832	50148694	Pvu8g2325	8	53809315	53814596	ECH
	Pvu8g2325	8	53809315	53814596	Pvu8g2325	8	53809315	53814596	ECH
	Pvu1g2500	1	50143832	50148694	Pvu8g2325	8	53809315	53814596	PCT