Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2500 ATGAATCGGAGTTTCAGGGCTCAGGAGTCGCAAATGCACTCTGCGTTGAAGCGGAGGGAGCAACAATTTGGGGGTTTTAGGGCGTCGGTGATGAAGGAGAAGGAGGAGGAGCTCGCATTGTTTCTGGAGATGAAGAAGCGCGAGAAGGAGCGGAGTGATCTTCTGCTTAACGGCTCCGAGGAGTTCGATGCACCTCTCGGGTCGAATGCCAGCGCGAATCCCATATTTAGCATTTCGTCGTCTACGCCGGCTCCTGTGAGGAAGACTGGTGTTGATGAGTTTCTCAATTCGGAGAATGATAAGAATGACTATGACTGGCTTCTCACTCCTCCTGGTACTCCTCTTTTTCCTTCTTTGGAAATGGAAAGTCGAAGGACTGTTATGAGTCAGCTTGGTACTCCAACCACACGTCCTGTAGCATTAAAATCGAGGTTAGCAAATCATCAATCAGAGCCTGCTGTGAGGACTAATTTTGTATCTAAACAACCTGCTTCCTCTCCTGGGTTGAGCTCTTCAAGTGGGGGAACCAGGAGGCCTTCATCATCAGGGGGTCCAGGATCACGACCTGCAACTCCTACTGGACGCCCTACACTAACTGCATCTTCAAAATCATCAAGACCTTCGACACCTACACGGTCCACCTTACCTTCAACTAGGTCCATGGCAGCTACATCTAAGAACACAATTTCCACAGTCAAGCCTGCAGTTTCTACTACAAAGCCTCTGAGTTCTGCCGCTAAGACTCCAGTCCCTGCAGCCAAATCCACAATTCCTTCAAGATCCTCTACGCCCTTGTCAAGATCTGCTGCAAGATCATCTACGCCAACTAGCAGACCTACTTTACCTCCTTCCAGGTCCACATCAAGAGCATCTACCCCAACCAGGCGACCCTCTTTACCATCAAATGAACCCAGCATATCTGCTTCTTCAGTTAAAGCTTCTTTGAACCCTAAGCCAGCTACTGTGACATCAAGGCAGCCAACTCCTGTGACAACAAGAAAGCCCGCTCCTGTGAACTCAAGGCAGCCAGCAGTACCATCACGTGGCAGTTCACCAACAATGAGATCAAGACCATGGAAGCCGTCTGATATGCCAGGTTTTTCACTTGATGCCCCACCTAATTTGAGAACAACATTACATGACAGGCCTCTGTCAGCAACTAGGGGCAGGCCCGGAGCACCTACTTCTCGGTCTTCATCTATTGAGCCTTCTTCTAGTGGAAGACCCAGGCGACAGTCATGCTCTCCTTCAAGAGGAAGGGCTTCCAATGGTGTTGCTCATATCAGCGGAAACTCTATGCCAGCGGTTAGTCGAGGGCGCTCCAAAGTAAATGACAATGTTAGTCCCGTTGTAATGGGCAACAAAATGGTTGAGAGGGTAATAAATATGCGAAAACTAGCACCACCAATGATTGATGACAAAAACTCTCCGCGTAGTAATCTGTCCGGCAAGTCAACCTCATCTCCAGATAGCTCAGGTTTTGGAAGAACACTTTCTAAGAAGTCGTTGGATATGGCGATTAGGCATATGGATATAAGGAGAACCATTCCAGGCAATTTACGGCCATTGATGACAAATATTCCGGCATCTTCTTTGTATAGCGTGAGGTCTGGATCTCATCATGGCCGAACAATCAGTGTTTCAGGCTCTCCACATGCCACAAGCAGTAATGCTAGTTCGGAACTGAGCGTAAACCAAAATGGAATTTGTTTAGATAGCAGTGAAGTAGATGATGATATTGGCAGTGAGAGATGTGGTCAATCCCCTGCCAGTGTTCGGGGAAGGTAA 1788 0.4821 MNRSFRAQESQMHSALKRREQQFGGFRASVMKEKEEELALFLEMKKREKERSDLLLNGSEEFDAPLGSNASANPIFSISSSTPAPVRKTGVDEFLNSENDKNDYDWLLTPPGTPLFPSLEMESRRTVMSQLGTPTTRPVALKSRLANHQSEPAVRTNFVSKQPASSPGLSSSSGGTRRPSSSGGPGSRPATPTGRPTLTASSKSSRPSTPTRSTLPSTRSMAATSKNTISTVKPAVSTTKPLSSAAKTPVPAAKSTIPSRSSTPLSRSAARSSTPTSRPTLPPSRSTSRASTPTRRPSLPSNEPSISASSVKASLNPKPATVTSRQPTPVTTRKPAPVNSRQPAVPSRGSSPTMRSRPWKPSDMPGFSLDAPPNLRTTLHDRPLSATRGRPGAPTSRSSSIEPSSSGRPRRQSCSPSRGRASNGVAHISGNSMPAVSRGRSKVNDNVSPVVMGNKMVERVINMRKLAPPMIDDKNSPRSNLSGKSTSSPDSSGFGRTLSKKSLDMAIRHMDIRRTIPGNLRPLMTNIPASSLYSVRSGSHHGRTISVSGSPHATSSNASSELSVNQNGICLDSSEVDDDIGSERCGQSPASVRGR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2500 595 MobiDBLite consensus disorder prediction 467 497 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 391 447 - -
Pvu1g2500 595 PANTHER PROTEIN, PUTATIVE-RELATED 1 183 - -
Pvu1g2500 595 PANTHER PROTEIN, PUTATIVE-RELATED 183 595 - -
Pvu1g2500 595 Coils Coil 31 51 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 254 357 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 539 595 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 147 245 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 539 572 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 475 497 - -
Pvu1g2500 595 MobiDBLite consensus disorder prediction 147 447 - -
Pvu1g2500 595 PANTHER GASTRIC MUCIN-LIKE PROTEIN 183 595 - -
Pvu1g2500 595 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2500 Pvu-Chr1 50143832 50148694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2500 - - gmx:100783818 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2500 1 50143832 50148694 Pvu1g2500 1 50143832 50148694 ECH
Pvu1g2500 1 50143832 50148694 Pvu8g2325 8 53809315 53814596 ECH
Pvu1g2500 1 50143832 50148694 Pvu8g2325 8 53809315 53814596 PCT