Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2319 ATGGGAAACAACATGGCAACCCACAACGAATACAAAAGTTTATTGTTCTTTATCAGAAAGTTCAAGGTCATCGAGCCAGATCCACCTCAAGACCTTGAGGAGGCGTTTTCAAAGTTCACAGGAGGAGAGTCCCACATGTCCGTGGAGCAGCTCCACCGTTTCATGGTGGAGCACCAGGGTGAAGAGCACTACACCTTGTCGGATTCGGAAAAAGTTTTTGAGAAGGTTTTGCAGGAGAGAAAGACGTGTCAAGAAACTGTTCAGGCTGATCACAACCGAGAACATGAGATCACCCTGGATGAACTCTTCCGATTTTTGCTTCATAATGATTTCAATGCTCCCTTGAAAGCCCAGGTACATCATGATATGGGTGCTCCATTGTCACATTACTTCATATATACAGGCCATAACTCCTATTTGACAGGGAATCAGCTCAGCAGTGACTGCAGTGAAGAGCCAATCATAAAGGCTTTGAAACGAGGCGTGCGTGTTATCGAACTTGATTTATGGCCAACTTGCTATAAGGATGATATTAAAGTAGATCATGGATGGACTTTTACCAGTCCTGCCTCAGTGGAGAAATGTCTAGAGTGCATAAATGAATATGGTTTTGTTGCATCTCAGTACCCAGTGATCATAACCATAGAAGACCATCTTACAACAGATCTTCGAGCTAAATTTACAGAAATGGTAACTCGAATATTTGGGGAAGTGCTTTATTACCCTGGGGAAGAATGCTTAATAGAATTCCCTTCACCAGAATCACTGAAAAATCGAGTCATTATATCCACCAAACCCCCAAGAGAACGTTTTGAGTCCAACCAAATCAAGGACAATAGCATCAGTCCTTTACTGAATGAAAGTGAATCACCTGAAGAGGAATCATTCGGAGATGCATCTCCAAACTCCAGTAGGAACGAAGTAGAGACTGAGGACACAAATGGCAGTGATCGTGATGAGGGAAGCATAAGTGCAAGCGAATATGACCAGAAACCATATCTGGAGTGTTCACCTGATTACAAACGCATAATTACTATCCATAATAGGAAACTGAAGGGTTGCCTGAAGGAGAAATTGAGAACTGAAGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAATACTCTTGAAAAGGCTTCAGAATCGCATGGAGCAGATATTCTTAGGTTCACACAGAAAAATATCCTCAGGGTTTACCCGAGTGCAATGCGTGTCAAATCCACAAATTTCAAGCCACATATTGGGTGGATGTATGGGGCTCAGATGGTTGCATTCAATATGCAGGGCCATGGCAAATCGCTGTGGTTGATGCAGGGAATGTTCAGGGCAAATGGAGGATGTGGTTATGTAAAGAAACCTCAAATTCTAATGCAGAAGCATCAATGTGGCAATGAGTTTGATCCTGCAAGGATACAGTCAGTGAAGAAGAAGACATTAAAGGTTAAAGTATACATGGGACATGGATGGAGCTCAGATTTCACCCCTACATACTTTGATAAGTTCTCTCCGCCAGACTTCTTCACTAAGATCCGTGTTATTGGAATGCCTGGTGATGTTGCAAAGAAGAAAACAAAGGTCATGATGGACAACTGGTTTCCTGTTTGGAATGAAGAATTTGAATTCTCTTTAAGTGTTCCAGAGCTTGCACTGCTGCTGATACAAGTAAAGGACAAAGATCAGGGAAGGGATGACTTTGCTGGGCAGACATGTTTACCAGTGTCAGAGTTAAAACATGGATTTCGCTCTGTGCCTTTATACAACAGAAAGGGAGAGAAATTTAAATCTGTAAAGCTCTTGATGCGATTTCAGTTTGAATGA 1815 0.4226 MGNNMATHNEYKSLLFFIRKFKVIEPDPPQDLEEAFSKFTGGESHMSVEQLHRFMVEHQGEEHYTLSDSEKVFEKVLQERKTCQETVQADHNREHEITLDELFRFLLHNDFNAPLKAQVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALKRGVRVIELDLWPTCYKDDIKVDHGWTFTSPASVEKCLECINEYGFVASQYPVIITIEDHLTTDLRAKFTEMVTRIFGEVLYYPGEECLIEFPSPESLKNRVIISTKPPRERFESNQIKDNSISPLLNESESPEEESFGDASPNSSRNEVETEDTNGSDRDEGSISASEYDQKPYLECSPDYKRIITIHNRKLKGCLKEKLRTEGEVRRLSWSENTLEKASESHGADILRFTQKNILRVYPSAMRVKSTNFKPHIGWMYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYVKKPQILMQKHQCGNEFDPARIQSVKKKTLKVKVYMGHGWSSDFTPTYFDKFSPPDFFTKIRVIGMPGDVAKKKTKVMMDNWFPVWNEEFEFSLSVPELALLLIQVKDKDQGRDDFAGQTCLPVSELKHGFRSVPLYNRKGEKFKSVKLLMRFQFE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2319 604 Pfam C2 domain 477 578 IPR000008 -
Pvu8g2319 604 SUPERFAMILY EF-hand 16 123 IPR011992 -
Pvu8g2319 604 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 369 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2319 604 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 477 603 IPR035892 -
Pvu8g2319 604 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Pvu8g2319 604 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 265 IPR000909 -
Pvu8g2319 604 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Pvu8g2319 604 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Pvu8g2319 604 PRINTS Phospholipase C signature 249 266 IPR001192 GO:0035556
Pvu8g2319 604 PRINTS Phospholipase C signature 394 415 IPR001192 GO:0035556
Pvu8g2319 604 PRINTS Phospholipase C signature 415 433 IPR001192 GO:0035556
Pvu8g2319 604 PRINTS Phospholipase C signature 570 580 IPR001192 GO:0035556
Pvu8g2319 604 Gene3D C2 domain 469 604 IPR035892 -
Pvu8g2319 604 MobiDBLite consensus disorder prediction 271 327 - -
Pvu8g2319 604 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 366 453 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2319 604 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 468 IPR017946 GO:0006629|GO:0008081
Pvu8g2319 604 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 265 - -
Pvu8g2319 604 SMART C2_3c 477 584 IPR000008 -
Pvu8g2319 604 CDD C2_PLC_like 483 604 - -
Pvu8g2319 604 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 604 - -
Pvu8g2319 604 Gene3D - 28 116 - -
Pvu8g2319 604 ProSiteProfiles C2 domain profile. 459 586 IPR000008 -
Pvu8g2319 604 SMART plcx_3 121 265 IPR000909 -
Pvu8g2319 604 SUPERFAMILY PLC-like phosphodiesterases 121 457 IPR017946 GO:0006629|GO:0008081
Pvu8g2319 604 MobiDBLite consensus disorder prediction 276 309 - -
Pvu8g2319 604 SMART plcy_3 340 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2319 604 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 604 IPR001192 GO:0035556
Pvu8g2319 604 MobiDBLite consensus disorder prediction 310 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2319 Pvu-Chr8 53766787 53770834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2319 3 604 Acyl Lipid Metabolism Gene Families AT2G40116 52.404 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2319 K05857 - gmx:100820253 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2513 1 50261724 50265932 Pvu8g2319 8 53766787 53770834 PCT