Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2513 ATGAAACCAGAGAAAAACAAAGGCTCTCTTTCCAAGGGAAGGGTGAGAATGAAAATTGAAGCATTCAAGATCAGGATGTTAAGTTTGTTGACCAAAAAGGATGAGGTTTACAAGGCAGAAACACCTTTGGATCTTAAGGAAGCCTTTTCCAAGTTTGCAAGAGGAGGGAACCGAATGAATAAGAGTCAGCTTCTTCAGTTCATTGTGGAGCACCAGGGAGAAAATATCTGCAGCGAAGAGGATTTGGATAAAATAATTGAGAAATATTTGCTAGTAGGGAGTTGTAGTTCTAGCTCTAAAACAAGATTTACAAGAACTCCTGATGTATACAAGAAACAAGGGTTAAGTCTCAGTGACTTCATCGATTTTCTGCTTCAGCATGATTTCAATGCTGTCTTGAATGACGAGGTACATCATGATATGAGTGCTCCGTTGTCACATTATTTCATGTATACGGGACACAATTCCTATCTGACTGGGAATCAACTTACCAGTGATAGCAGTGACGAGCCAATTATAGAGGCTTTGAAACAAGGTGTACGAGTAATTGAACTAGATTTATGGCCATCTAAATCTTCAACTAAAGATGGTATTAAAGTGGTTCATGGAAGGACTTTTACCACTCCAATCTCCGTACGCACATGTCTGCAATCCATAAAGAAATATGCCTTTTATAAATCAGATTACCCAGTAATTCTTACTTTGGAAGACCACCTAAAACCAAAACATCAGGATAAATTTGCAGAAATGGCATCTGAAATACTTGGAGAAATTCTTTATTGTCCGCAGACAGATTCTTTGACAGAATTCCCCTCACCAGAATCATTGAGAAACCGGATAATTATATCAACCAAACCACCAAAGGAAAATCAGCAATCTGATAATATCAGCAAAAGAAAAGCTGGGTCAAATGGATTTGAATTCCCTGACAAAGAATCATGGGGACAAGAAGAATCATGGGGACGAGAAGAATCATGGGGACTGGAATTGTCAGATTCCGTGGCTAAACTGAAAACTGGGGACAAGAGGAATGCAAGTGATGGAGATCGGGAAAATATAAACACAAGCGATAACATTCCAAACCAACTCGGTGTGTCTCGATACAAACACTTGATCACAATCCAGGGTGGGAAAGCAAAAGGTTCTATGAAGGATCAATTGAAAGATGACATTAAAGTTAGACGGCTTAGTTTGAGTGAGAAGAAACTAAAAAGTGCTTCTGAGTCTCATGGAGCTGACCTCATTAGGTTCACACAGAAAAATATCCTCAGGGTTTTTCCTAAAGGAGAACGTGTCAAATCCTCAAATTTCAGGCCCCATTTAGGGTGGATGTACGGAGCTCAGATGGTTGCATTCAATATGCAGGGGCATGGCAAATCACTTCGGTTGATGCAGGGAATGTTCAGAGCAAATGGAGGGTGTGGTTATGTTAAAAAGCCTGAATTTATAATCCGAACACTTCCACATGACGAGGTGTTTGATCCTAAAAAGCCACTGCCAGTGAAGGAGATCTTAAAAGTAAAAGTCTACAAAGGAGATGGTTGGAATTTAGATTTCAGTCCAACACACTTTGATCGATTCTCTCCACCAGACTTTTACACAAAGGTGTGTATAGTTGGAGTGCCAGGTGATTGTGTGAAGAAGAAAACAAGTGTAAAGGTGGACACATGGTATCCTGTTTGGGATGAAGAACTTAAATTTGAATTGAGGGTTCCTGAGCTTGCTTTGCTTAGGATAGAAGTAAAGGACAAAGATAAGGGGAAAGATGACTTTGCAGGACAAACTTGTTTGCCAGTATCAGAGCTAAGGCAGGGATTTCGGTCAGTTCCTCTGTTTGACCCCAAGGGAAGGAAATTTAAATCTGTCAAGCTTCTAATGCGCTTTAAGATTGAAACCTTAGATAAATTGTAG 1911 0.3987 MKPEKNKGSLSKGRVRMKIEAFKIRMLSLLTKKDEVYKAETPLDLKEAFSKFARGGNRMNKSQLLQFIVEHQGENICSEEDLDKIIEKYLLVGSCSSSSKTRFTRTPDVYKKQGLSLSDFIDFLLQHDFNAVLNDEVHHDMSAPLSHYFMYTGHNSYLTGNQLTSDSSDEPIIEALKQGVRVIELDLWPSKSSTKDGIKVVHGRTFTTPISVRTCLQSIKKYAFYKSDYPVILTLEDHLKPKHQDKFAEMASEILGEILYCPQTDSLTEFPSPESLRNRIIISTKPPKENQQSDNISKRKAGSNGFEFPDKESWGQEESWGREESWGLELSDSVAKLKTGDKRNASDGDRENINTSDNIPNQLGVSRYKHLITIQGGKAKGSMKDQLKDDIKVRRLSLSEKKLKSASESHGADLIRFTQKNILRVFPKGERVKSSNFRPHLGWMYGAQMVAFNMQGHGKSLRLMQGMFRANGGCGYVKKPEFIIRTLPHDEVFDPKKPLPVKEILKVKVYKGDGWNLDFSPTHFDRFSPPDFYTKVCIVGVPGDCVKKKTSVKVDTWYPVWDEELKFELRVPELALLRIEVKDKDKGKDDFAGQTCLPVSELRQGFRSVPLFDPKGRKFKSVKLLMRFKIETLDKL* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2513 636 MobiDBLite consensus disorder prediction 283 300 - -
Pvu1g2513 636 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 22 636 - -
Pvu1g2513 636 MobiDBLite consensus disorder prediction 335 350 - -
Pvu1g2513 636 MobiDBLite consensus disorder prediction 311 325 - -
Pvu1g2513 636 SUPERFAMILY EF-hand 17 134 IPR011992 -
Pvu1g2513 636 Gene3D C2 domain 498 635 IPR035892 -
Pvu1g2513 636 SMART plcx_3 139 285 IPR000909 -
Pvu1g2513 636 PRINTS Phospholipase C signature 144 162 IPR001192 GO:0035556
Pvu1g2513 636 PRINTS Phospholipase C signature 170 190 IPR001192 GO:0035556
Pvu1g2513 636 PRINTS Phospholipase C signature 269 286 IPR001192 GO:0035556
Pvu1g2513 636 PRINTS Phospholipase C signature 422 443 IPR001192 GO:0035556
Pvu1g2513 636 PRINTS Phospholipase C signature 443 461 IPR001192 GO:0035556
Pvu1g2513 636 PRINTS Phospholipase C signature 597 607 IPR001192 GO:0035556
Pvu1g2513 636 Gene3D Phosphatidylinositol (PI) phosphodiesterase 137 496 IPR017946 GO:0006629|GO:0008081
Pvu1g2513 636 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 504 629 IPR035892 -
Pvu1g2513 636 Pfam Phosphatidylinositol-specific phospholipase C, X domain 141 285 IPR000909 -
Pvu1g2513 636 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 139 285 - -
Pvu1g2513 636 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 397 483 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu1g2513 636 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 22 636 IPR001192 GO:0035556
Pvu1g2513 636 SUPERFAMILY PLC-like phosphodiesterases 139 484 IPR017946 GO:0006629|GO:0008081
Pvu1g2513 636 SMART plcy_3 368 484 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu1g2513 636 MobiDBLite consensus disorder prediction 283 361 - -
Pvu1g2513 636 Pfam C2 domain 504 605 IPR000008 -
Pvu1g2513 636 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 390 482 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu1g2513 636 SMART C2_3c 504 611 IPR000008 -
Pvu1g2513 636 Gene3D - 40 136 - -
Pvu1g2513 636 CDD C2_PLC_like 502 631 - -
Pvu1g2513 636 ProSiteProfiles C2 domain profile. 486 613 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2513 Pvu-Chr1 50261724 50265932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2513 21 631 Acyl Lipid Metabolism Gene Families AT2G40116 51.981 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2513 K05857 - gmx:100803435 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2513 1 50261724 50265932 Pvu1g2513 1 50261724 50265932 ECH
Pvu1g2513 1 50261724 50265932 Pvu8g2319 8 53766787 53770834 PCT