Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2318 ATGGCCTCCGTCACCTACAGCTACAAAATGTTCAAGTACTTCAACCGGACCTATGCCATCTCCGAGCAGGCCCCTCCCCCGGACGTCAAGGACGCATTCTCCCTCTTCGCCGACGGCGCCGACTCCATGTCCGCCGACCAGCTCCTCCACTTTCTGCACGATCACCAACTCGAATCGGACTACACAGAAGAGGATTCCAACCGCATCGTGGAAACCGTCCTGCAATCGCGCGCACAAAACACCGAATGCGACTCCGAGAACACCGGTCTCACGCTCGACGAGTTCTTCCGCTTCTTGTTCCTCGTCGATTTCAACGATGCTCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCCTATCTGACTGGGAATCAGCTGAGCAGCGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAAAAAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATCGACGTAGTTCATGGAAGGACACTTACTGCTCCTGTCTCACTTATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGAGTACCCACTAATTATAACTTTAGAGGACCACCTTACACCATTTCTTCAAGCTAAAGTTGCAGAGATGGTAGCTCAAGTATTTGGAGATCTGCTATATTATCCTGAGACGGATCTTCTCACAGAATTTCCCACACCAGAGTCGGTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCCATTCAAGGATAGTGACAGTGAGAGGGAATCAATTGATGAAGGAACATCATCGCCAGGCATTATCACTGAATTGGAAGTTGCTGATGAAAAGTCCGATGGAAATGATCTTGATGAGGAAAGCTTGAATGCCCGTGATAAAAAACCAGACCAACAGAGTATATCAGAGTACAAACGTTTAATTACAATCCATGCTGGGAAGCCAAAGGGTAATGTAAAGGACCACTTAAATGTTGTTGGGGGTGTAAAGCGCTTGAGCTTGAGCGAGCAGGAACTTGAAAGGGCTTCTATCGCTCATGGATCAGATATTGTTAGGTATACACAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTACCTCCTCAAATTACAGGCCACATATAGGATGGATCTACGGAGCTCAGATGGTGGCATTTAACATGCAGGGGCACGGAAAATCACTCTGGTATATGCAGGGGATGTTTAGAGCGAATGGCGGGTGTGGTTATGTGAAAAAACCTTCATTTCTGATAGAACAAGGCCCAGATGATGAGGTTTTTGATCCTAAAAAACCAATGCCAGTGAAAAAGACATTGATGGTAAAAGTGTTTTTGGGAAACGGGTGGAGCACAGATTTCAGTAAAACACACTTCGATACATTCTCTCCGCCAGACTTTTACACAAAGGTTTGCATTGTTGGAATACCCGCTGATCGAGTGAATAGGAAGACCAAGATAATTTATGATGATTGGTTTCCCGTTTGGGATGAAGAGTTTGAATTTCCTTTGTGTGTTCCAGAACTAGCTTTGCTCTGGATAGAGGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGCGGGCAAGCATGTTTCCCAGTCCCTGAGCTAAGATCTGGTTTCCGGGTAGTCCCACTATTTGATGAGAAGGGCGAGCAATTGAAAACTGTAAAGCTTTTAATGCGGTTTCAGTTCAAATGA 1767 0.4426 MASVTYSYKMFKYFNRTYAISEQAPPPDVKDAFSLFADGADSMSADQLLHFLHDHQLESDYTEEDSNRIVETVLQSRAQNTECDSENTGLTLDEFFRFLFLVDFNDALKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQKGVRVIELDLWPNSTKDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSEYPLIITLEDHLTPFLQAKVAEMVAQVFGDLLYYPETDLLTEFPTPESVKGRILISTKPPKEYLESKPFKDSDSERESIDEGTSSPGIITELEVADEKSDGNDLDEESLNARDKKPDQQSISEYKRLITIHAGKPKGNVKDHLNVVGGVKRLSLSEQELERASIAHGSDIVRYTQKNIIRVYPKGTRVTSSNYRPHIGWIYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPSFLIEQGPDDEVFDPKKPMPVKKTLMVKVFLGNGWSTDFSKTHFDTFSPPDFYTKVCIVGIPADRVNRKTKIIYDDWFPVWDEEFEFPLCVPELALLWIEVREYDKHEKDDFGGQACFPVPELRSGFRVVPLFDEKGEQLKTVKLLMRFQFK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2318 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 587 IPR035892 -
Pvu8g2318 588 Gene3D C2 domain 454 588 IPR035892 -
Pvu8g2318 588 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 587 - -
Pvu8g2318 588 CDD C2_PLC_like 458 588 - -
Pvu8g2318 588 SMART C2_3c 460 568 IPR000008 -
Pvu8g2318 588 SMART plcx_3 114 258 IPR000909 -
Pvu8g2318 588 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2318 588 Pfam C2 domain 481 562 IPR000008 -
Pvu8g2318 588 ProSiteProfiles C2 domain profile. 441 570 IPR000008 -
Pvu8g2318 588 Gene3D - 23 111 - -
Pvu8g2318 588 SUPERFAMILY PLC-like phosphodiesterases 114 441 IPR017946 GO:0006629|GO:0008081
Pvu8g2318 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 353 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2318 588 Pfam Phosphatidylinositol-specific phospholipase C, X domain 116 258 IPR000909 -
Pvu8g2318 588 Gene3D Phosphatidylinositol (PI) phosphodiesterase 112 452 IPR017946 GO:0006629|GO:0008081
Pvu8g2318 588 PRINTS Phospholipase C signature 119 137 IPR001192 GO:0035556
Pvu8g2318 588 PRINTS Phospholipase C signature 145 165 IPR001192 GO:0035556
Pvu8g2318 588 PRINTS Phospholipase C signature 242 259 IPR001192 GO:0035556
Pvu8g2318 588 PRINTS Phospholipase C signature 378 399 IPR001192 GO:0035556
Pvu8g2318 588 PRINTS Phospholipase C signature 399 417 IPR001192 GO:0035556
Pvu8g2318 588 PRINTS Phospholipase C signature 554 564 IPR001192 GO:0035556
Pvu8g2318 588 SMART plcy_3 324 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu8g2318 588 SUPERFAMILY EF-hand 12 116 IPR011992 -
Pvu8g2318 588 Pfam Phosphoinositide-specific phospholipase C, efhand-like 28 99 IPR015359 -
Pvu8g2318 588 MobiDBLite consensus disorder prediction 264 320 - -
Pvu8g2318 588 MobiDBLite consensus disorder prediction 264 280 - -
Pvu8g2318 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 114 258 - -
Pvu8g2318 588 MobiDBLite consensus disorder prediction 304 320 - -
Pvu8g2318 588 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 587 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2318 Pvu-Chr8 53756493 53761895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2318 3 588 Acyl Lipid Metabolism Gene Families AT2G40116 59.804 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2318 K05857 - gmx:100777010 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2514 1 50266851 50273417 Pvu8g2318 8 53756493 53761895 ECH
Pvu8g2318 8 53756493 53761895 Pvu8g2318 8 53756493 53761895 ECH
Pvu1g2514 1 50266851 50273417 Pvu8g2318 8 53756493 53761895 PCT