Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2514 ATGGCCACCCACAACTACAAAGTCTTCAGCTGCTTCAACCGGAAGTTCACACTCACCGAACCGGAGCCACTGCCCGACGTCCAAAAAGCCTTTTCTGAATTTTCTGCCGGCGCCTCCTCCATGTCCGCCGATCACCTCCTCCGGTTTCTGGCGGAGCATCAGGGCGAAGTGGACTGCACCGCTTCCGATTCCAACCAGATCCTCCAGCAATCGAGGAAAGATGACCGGGAAAGTGGATTCGATCTCCACGACTTCTTCCATTTCCTGCAACACAACGATTTCAACGCTCCCTTGAAATCTCAGGTACATCATGATATGAATGCTCCATTGTCACATTATTTCGTATACACTGGGCACAATTCCTATCTGACCGGCAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCGGATAAAGATGATATCGATGTAGTTCATGGAAGGACTCTTACCACTCCTGTCTCACTCCTCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTAAGTACCCACTCGTTATAACTTTAGAAGATCACCTTACTCCAGATCTTCAAGCTAAAGTTGCAAAGATGGCCACACAAGTATTTGGAGAATTGCTTCACATCCCTCAGACAGATTCTCTGACGGAATTCCCCTCACCAGAATCAATGAAAGGTCGAATTCTTATATCAACAAAACCACCAAAAGAATTTCTTGAATCCAATGACATGGAATCAGATGACGAGGTTTCCTCATTGCCAGACAATACTAATGCACAAGGAATTGATGATAAGCAGAGTTCACTTGAGTACAAATGCTTGATTACAATCCATGCTGGAAAACCGAAGGGTGAGATACAGGACGAATTAAAAGCTGCTGGTAAAGTTAGGCGCTTAAGCTTGAGTGAGCAAGCACTTGAAAAGGCTTCTGAATCTTATGGAGCTGATATTGTCAGGTTTACGCAGAACAATATTCTCAGAGTTTATCCAAAGGGAACACGTCTCAACTCCTCAAATTACAAACCACACATAGGGTGGACGTACGGAGCTCAGATGGTTGCGTTTAACATGCAGGGGCATGGTAAATCACTTTGGTACATGCAAGGAATGTTTAGAACAAATGGAGGGTGCGGTTATGTGAAAAAGCCTGAATTTTTAATTCGAAAAGGTCCACATAATGAGGTTTTTGATCCTAAAATAGTATTGCCAGTGAAGACAACATTAAAGGTAAAAGTCTACACGGGGTACGGTTGGAGCTTAGATTTCAGCCCAACAGACTTTGATACTTACTCACCACCAGACTTTTACGTTAAGGTTTGTATCGTTGGAGTTCCGGCTGATATGGCCAAGAAGAAAACAAGGGTAATTTCAAATAATTGGTTTCCTGTCTGGGAAGAAGAGTTTGATTTCCCTTTGACTGTTCCAGAGCTGGCTTTGCTCCGCATAGAGGTTCGAGAAAATGATAAGCGTCAAAAGGATGACTTTGGTGGACAGACGTGTTTGCCAGTCTCAGAACTAAAATCTGGATTCCGATCTGTCCCTCTATATGATGAAAAGGGTGACAAATTTAAATCTGTGAAGCTTTTAATGCGGTTTCAGTTTAGATGA 1653 0.4313 MATHNYKVFSCFNRKFTLTEPEPLPDVQKAFSEFSAGASSMSADHLLRFLAEHQGEVDCTASDSNQILQQSRKDDRESGFDLHDFFHFLQHNDFNAPLKSQVHHDMNAPLSHYFVYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSDKDDIDVVHGRTLTTPVSLLQCLKSIKEYAFVKSKYPLVITLEDHLTPDLQAKVAKMATQVFGELLHIPQTDSLTEFPSPESMKGRILISTKPPKEFLESNDMESDDEVSSLPDNTNAQGIDDKQSSLEYKCLITIHAGKPKGEIQDELKAAGKVRRLSLSEQALEKASESYGADIVRFTQNNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGHGKSLWYMQGMFRTNGGCGYVKKPEFLIRKGPHNEVFDPKIVLPVKTTLKVKVYTGYGWSLDFSPTDFDTYSPPDFYVKVCIVGVPADMAKKKTRVISNNWFPVWEEEFDFPLTVPELALLRIEVRENDKRQKDDFGGQTCLPVSELKSGFRSVPLYDEKGDKFKSVKLLMRFQFR* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2514 550 Pfam C2 domain 445 524 IPR000008 -
Pvu1g2514 550 ProSiteProfiles C2 domain profile. 403 532 IPR000008 -
Pvu1g2514 550 SMART plcx_3 104 248 IPR000909 -
Pvu1g2514 550 Gene3D C2 domain 417 550 IPR035892 -
Pvu1g2514 550 CDD PI-PLCc_plant 103 389 - -
Pvu1g2514 550 SUPERFAMILY EF-hand 5 106 IPR011992 -
Pvu1g2514 550 Gene3D - 22 99 - -
Pvu1g2514 550 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 315 401 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu1g2514 550 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
Pvu1g2514 550 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 312 400 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu1g2514 550 CDD C2_PLC_like 420 550 - -
Pvu1g2514 550 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 422 549 IPR035892 -
Pvu1g2514 550 SMART C2_3c 422 530 IPR000008 -
Pvu1g2514 550 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 549 - -
Pvu1g2514 550 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Pvu1g2514 550 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Pvu1g2514 550 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
Pvu1g2514 550 PRINTS Phospholipase C signature 340 361 IPR001192 GO:0035556
Pvu1g2514 550 PRINTS Phospholipase C signature 361 379 IPR001192 GO:0035556
Pvu1g2514 550 PRINTS Phospholipase C signature 516 526 IPR001192 GO:0035556
Pvu1g2514 550 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 74 IPR015359 -
Pvu1g2514 550 MobiDBLite consensus disorder prediction 251 277 - -
Pvu1g2514 550 SMART plcy_3 286 402 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pvu1g2514 550 SUPERFAMILY PLC-like phosphodiesterases 104 403 IPR017946 GO:0006629|GO:0008081
Pvu1g2514 550 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Pvu1g2514 550 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 549 IPR001192 GO:0035556
Pvu1g2514 550 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 414 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2514 Pvu-Chr1 50266851 50273417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2514 2 549 Acyl Lipid Metabolism Gene Families AT2G40116 59.068 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2514 K05857 - gmx:100786997 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2514 1 50266851 50273417 Pvu8g2318 8 53756493 53761895 ECH
Pvu1g2514 1 50266851 50273417 Pvu1g2514 1 50266851 50273417 ECH
Pvu1g2514 1 50266851 50273417 Pvu8g2318 8 53756493 53761895 PCT