Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2289 ATGCTTCTCCGAACCGCTGCTGCTTCGTCACTCTCCCTCTTCAACCCCAACGCCGAACCTTCGCGTTTGGTTCCCGTTCAGGGAAACAAAGCGAGCCGGTTGGTGGTTCGCGCCGCCAAAGGATCCACGAACCACCGCGCCCTAACCGGCGTGATTTTTGAACCGTTCGAGGAGGTAAAGAAGGAGCTCGATCTCGTTCCCATCGTTCCACAAGCTTCTCTCGCACGCCAAAAATACGTTGACGAATCTGAAGCCGTCGTTAACGAACAAATCAATGTGGAGTATAACGTTTCGTATGTATATCATGCTATGTTTGCGTACTTCGATAGGGATAACGTTGCGCTGAGAGGTCTTGCTAAGTTTTTCAAGGAATCGAGTGAAGAAGAACGAGAGCATGCTGAGAAATTGATGGAGTATCAGAACAAGCGTGGTGGAAAAGTGAAGTTGCAGTCAATTGTGATGCCGCTTTCTGAGTATGATCATGCAGATAAGGGGGATGCCCTGTACGCAATGGAACTCGCTCTATCATTAGAGAAACTAACGAACGAAAAGCTCCTTCACTTGCACAGTGTTGCCACGAAGAACGGTGACGTGCAGTTGACAGACTTCGTCGAAAGCGAGTTTCTGGGTGAACAGGTGGAAGCCATCAAAAGAATATCTGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTGCTACACGAGGCAGCTTGA 744 0.4892 MLLRTAAASSLSLFNPNAEPSRLVPVQGNKASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPIVPQASLARQKYVDESEAVVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEYDHADKGDALYAMELALSLEKLTNEKLLHLHSVATKNGDVQLTDFVESEFLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEAA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2289 247 Pfam Ferritin-like domain 87 229 IPR008331 GO:0008199
Pvu8g2289 247 ProSitePatterns Ferritin iron-binding regions signature 2. 197 217 IPR014034 -
Pvu8g2289 247 PANTHER FERRITIN 22 246 - -
Pvu8g2289 247 Gene3D - 45 246 IPR012347 -
Pvu8g2289 247 Coils Coil 122 143 - -
Pvu8g2289 247 CDD Euk_Ferritin 81 240 - -
Pvu8g2289 247 ProSiteProfiles Ferritin-like diiron domain profile. 77 230 IPR009040 -
Pvu8g2289 247 PANTHER FERRITIN 22 246 IPR001519 GO:0006826|GO:0006879|GO:0008199
Pvu8g2289 247 SUPERFAMILY Ferritin-like 71 243 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2289 Pvu-Chr8 53370389 53373213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2289 K00522 - gmx:547477 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2540 1 50478825 50481129 Pvu8g2289 8 53370389 53373213 ECH
Pvu8g2289 8 53370389 53373213 Pvu8g2289 8 53370389 53373213 ECH
Pvu1g2540 1 50478825 50481129 Pvu8g2289 8 53370389 53373213 PCT