Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2540 ATGCTTCTCAGAACCGCTTCTTCCTTCTCTCTACTCAACCTCAACGCCATCGCCAACGCCACCGCCACCGCCTCCGCTGACCATGTACTCCCTCTCATAAACTCTTCTTCTTCTTCTGCTATTCGCTGCTCTCATGCGAAAAGTTTCGTTCCCAGCGCCTCCAAGGGCTCCAACAACCGTCCCGTAACCGGCGTCGTTTTTGAACCCTTTGAAGAGGTAAAGAAGGAGCTCGACCTCGTCCCCACGCTCCCAGAAGCTTCCCTTGCTCGCCAGAAGTACACCCATGAGTCTGAGGCTGTTATCAACGAACAGATCAATGTGGAGTACAATGTTTCGTATGTTTATCATGCGATGTTTGCCTACTTCGACAGGGACAATGTTGCGCTCAAGGGTCTTGCCAAATTTTTCAAGGAGTCAAGTGAGGAGGAAAGGGAGCATGCTGAGAAATTGATGGAATATCAGAACAAACGTGGTGGAAAAGTGAAGTTGCAATCTATTGTGTTGCCTTTTTCTGAGTTTGACCATGAGGAAAAGGGAGATGCCCTGTATGCAATGGAACTTGCTCTGTCGTTGGAGAAGCTAACAAATGAGAAGCTTCTTAAGTTGCACAGTGTTGCCTCAGAGAACAATGATGTGCAGTTGACAGATTTTATTGAAAGTGAATTTTTAGGTGAACAGGTGGAAGCTATTAAAAAAATCTCTGAGTACGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAAATGCTGCTCCATGAGGAGGGAGTGACTGCTTGA 795 0.4704 MLLRTASSFSLLNLNAIANATATASADHVLPLINSSSSSAIRCSHAKSFVPSASKGSNNRPVTGVVFEPFEEVKKELDLVPTLPEASLARQKYTHESEAVINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVLPFSEFDHEEKGDALYAMELALSLEKLTNEKLLKLHSVASENNDVQLTDFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVTA* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2540 264 ProSiteProfiles Ferritin-like diiron domain profile. 91 244 IPR009040 -
Pvu1g2540 264 PANTHER FERRITIN 1 263 IPR001519 GO:0006826|GO:0006879|GO:0008199
Pvu1g2540 264 PANTHER FERRITIN-2, CHLOROPLASTIC 1 263 - -
Pvu1g2540 264 Coils Coil 136 157 - -
Pvu1g2540 264 CDD Euk_Ferritin 95 254 - -
Pvu1g2540 264 Gene3D - 60 261 IPR012347 -
Pvu1g2540 264 ProSitePatterns Ferritin iron-binding regions signature 2. 211 231 IPR014034 -
Pvu1g2540 264 Pfam Ferritin-like domain 100 243 IPR008331 GO:0008199
Pvu1g2540 264 SUPERFAMILY Ferritin-like 85 258 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2540 Pvu-Chr1 50478825 50481129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2540 K00522 - gmx:547476 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2540 1 50478825 50481129 Pvu8g2289 8 53370389 53373213 ECH
Pvu1g2540 1 50478825 50481129 Pvu1g2540 1 50478825 50481129 ECH
Pvu1g2540 1 50478825 50481129 Pvu8g2289 8 53370389 53373213 PCT