Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2280 ATGACCCTATCTCTCTCCTTCCATCTCCCCTATATAAAACCACCCTCTCCCACTATCTCTTCCATTGCACCTTGCAACCTTAACCATCATTGCCACATACCTGTTTCTTGCTACACTGCAACCATGGAAGCTCTCAAGACCATTTTCTTGCCTCTTTTTCTTGTCTTGGCTTCAGCATTGTATTCAGCCAATGCCAAAATCCAGGAGCATCAGTTTGTTATTCAAGCAACACCAGTGAAGAGGCTGTGCAGCACTCACAACACCATCACTGTGAATGGACAATTCCCTGGCCCAACATTGGAAGTCAACAATGGAGACACTTTAGTCGTCAAAGTCACTAACAAAGCTCGTTACAATGTCACCATTCACTGGCATGGTATTCGGCAGATGAGAACAGGATGGGCTGATGGACCAGAATTTGTGACTCAGTGTCCCATTCGTCCTGGAGAGAGTTACACCTATCGTTTCACCATTGAAGGACAAGAAGGAACACTTTGGTGGCATGCTCATAGCTCATGGCTAAGAGCCACTGTTTATGGTGCTTTAATCATTTACCCCAGAGAGGGAGAGGCGTATCCTTTCCCTAAGCCAAAGCGCCAGACACCAATTCTTCTAGGGGAATGGTGGGACGCAAATCCGATCGATGTTCTGAGACAAGCCACACGAACAGGAGCGGCTCCGAATATTTCTGATGCATACACCATCAATGGCCAACCTGGCGATCTTTACAAGTGTTCTACCCAAGGTACCACCATTGTTCCAATAGATTCTGGCGAGACCAACCTCCTTCGAGTCATCAATGCTGCACTCAACCAACCCCTTTTCTTCACTGTGGCCAACCACAAACTCAAAGTGGTTGGAGCCGATGCTTCCTACCTTAAACCCTTCACCACCTCAGTCATCATGCTGGGTCCAGGCCAAACCACCGATGTTCTCATCCAAGGTGACCAACCACCCTCACGCTACTACATGGCTGCACGTGCCTACCAATCCGCACAAAACGCCCCTTTTGACAACACCACAACCACAGCCATTCTCAACTACAAATCTGCACCATGTCCTGCAAAGGGTGTCTCCATCAAACCCCTTATGCCCTCTCTCCCAGCTTACAACGACACCAACACAGTCACTACCTTCAGTAATAGCTTCAGAAGCCCCAGAAAAGTTGAAGTCCCTGCAGAAATCGATGACGACCTTTTCTTCACCATTGGCCTTGGACTCAACAACTGCCCTCCAAATTTCAGCCCAAACCAATGCCAAGGTCCAAATGGCACGCGTTTCACTGCCAGCATGAACAACGTCTCTTTTGTCCTCCCCAACAACGTCTCCATCTTGCAGGCTCATCACCTTGGAGTGCAAGGAGTGTTCACCACTGACTTTCCTACACAGCCTCCTTTGAAATTTGATTACACTGGTAATGTGAGTCGTTCACTGTGGCAACCCGTTCCCGGGACTAAGGTGACCAAGTTGAAGTTTGGATCGAGGGTGCAGATTGTGTTGCAGGACACTAGCATTGTGACCCCTGAGAACCACCCGATTCACCTTCATGGCTATGATTTCTACATAGTCGCAGAAGGGTTTGGAAATTTTGACCCCAAGAAAGACACTTCTAAGTTCAACCTTGTTGATCCACCTATGAGGAACACCGTTGCAGTACCTGTGAATGGATGGGCAGTTATCCGATTTGTTGCAGACAACCCAGGAGCTTGGATTATGCATTGTCACTTGGATGTTCACATAGGGTGGGGTTTGGCTACTGTGCTCTTGGTGGATAATGGAGTAGGGCTGTTGCAGTCCATAGAGGCCCCTCCAGAGGACCTACCTCTGTGTTAG 1833 0.4845 MTLSLSFHLPYIKPPSPTISSIAPCNLNHHCHIPVSCYTATMEALKTIFLPLFLVLASALYSANAKIQEHQFVIQATPVKRLCSTHNTITVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGESYTYRFTIEGQEGTLWWHAHSSWLRATVYGALIIYPREGEAYPFPKPKRQTPILLGEWWDANPIDVLRQATRTGAAPNISDAYTINGQPGDLYKCSTQGTTIVPIDSGETNLLRVINAALNQPLFFTVANHKLKVVGADASYLKPFTTSVIMLGPGQTTDVLIQGDQPPSRYYMAARAYQSAQNAPFDNTTTTAILNYKSAPCPAKGVSIKPLMPSLPAYNDTNTVTTFSNSFRSPRKVEVPAEIDDDLFFTIGLGLNNCPPNFSPNQCQGPNGTRFTASMNNVSFVLPNNVSILQAHHLGVQGVFTTDFPTQPPLKFDYTGNVSRSLWQPVPGTKVTKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHIGWGLATVLLVDNGVGLLQSIEAPPEDLPLC* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2280 610 SUPERFAMILY Cupredoxins 391 610 IPR008972 -
Pvu8g2280 610 PANTHER MULTI-COPPER OXIDASE 43 610 IPR045087 -
Pvu8g2280 610 SUPERFAMILY Cupredoxins 194 386 IPR008972 -
Pvu8g2280 610 TIGRFAM laccase: laccase 65 610 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pvu8g2280 610 SUPERFAMILY Cupredoxins 64 213 IPR008972 -
Pvu8g2280 610 Pfam Multicopper oxidase 460 592 IPR011706 GO:0005507|GO:0016491
Pvu8g2280 610 Gene3D - 414 610 IPR008972 -
Pvu8g2280 610 Pfam Multicopper oxidase 200 350 IPR001117 -
Pvu8g2280 610 CDD CuRO_3_LCC_plant 455 593 IPR034289 GO:0005507
Pvu8g2280 610 Gene3D - 198 388 IPR008972 -
Pvu8g2280 610 CDD CuRO_1_LCC_plant 70 186 IPR034288 GO:0005507
Pvu8g2280 610 Pfam Multicopper oxidase 75 188 IPR011707 GO:0005507
Pvu8g2280 610 Gene3D - 57 186 IPR008972 -
Pvu8g2280 610 PANTHER LACCASE 43 610 - -
Pvu8g2280 610 CDD CuRO_2_LCC_plant 202 348 IPR034285 -
Pvu8g2280 610 ProSitePatterns Multicopper oxidases signature 1. 568 588 IPR033138 -
Pvu8g2280 610 ProSitePatterns Multicopper oxidases signature 2. 573 584 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2280 Pvu-Chr8 53276921 53280333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2280 K05909 - gmx:100796956 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2550 1 50563497 50567102 Pvu8g2280 8 53276921 53280333 PCT