Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2271 ATGGTTTCAGTTGATAATGGTAAAGATGAAATTGAGGATTCTAATGGAATTAAAGTAAATGACTTTGCTTCCATAGATATTTCAACATCTGGAAGAACACTGGTGGGCAATGAAAACCCTCAGAGGAAGTTCCAGAGCACCTTGAGTTTTATTCCCAATAGGATCAACTTCTTGAAGTTTGGGTCTGCATCTGCCAAATTCAAGCGGCTTGCAACAGAAAAGGACCAGCTTTCACAGGCTGTGCCCTCACCGAGTTCGCTTCGCTTGAGGGAGCGCTTCAGCGGCATGTTTGCTAAGAAACTTGACTGGGGTTCACTCAAGAAGATGTGTGTTGAATGGATTAGGGACCCAATAAACATGGCCCTTTTTGTGTGGATCTTGTGTGTTGCTGTTTCAGGTGCAATTTTGTTCCTTGTCATGACTGGCATGTTGAATGGTGTGCTGCCAAGGAAGTCTCAGAGAAATGCATGGTTTGAAGTGAACAATCAAATACTCAATGCACTGTTTACACTGATGTGTTTGTACCAGCATCCAAAGAGGTGCTACCACCTTGTGCTTCTGTGCAGGTGGAGTCCACAAGATATCTCAAAACTTAGAAAGGTGTATTGCAAGAATGGGACTTATAAGCCCCATGAGTGGGCACACATGATGGTAGTGATCATTCTCCTTAATTTGAATTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTGGGGATATAAAAGATCTGACCGCCCGGCCATAGGAGTTGGAATATGCATATCTTTTGCTATTGGTGCACCTGCAGTCGCTGGTCTGTATGCCATTGTTAGCCCTTTAGGTAAAGATTATAATTCTGAGATGGATGAAGAAGCACTGGTTCAAGATTCTGTTGCTCCGAGGCTAGATCAGCTGAGAGTAAAATCATTTCAGAAGAAATATTCATTTGCATCCAGACAGCAACAGAGGGTTATTGAAAATAGACCACCACAGTGGAGTGGAGGAATACTTGACATTTGGAATGACATTTCGCAAGCATATCTATCACTTTTCTGTACATTTTGTGTCTTTGGTTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCACATTGCTACATTTATGCTGTTCTGTATGGCTCCCTTCTGGATTTTTACCTTGGCTGCTGTTAATATTGAAAATGACACTGTTAGACAGGCCCTAGTAGCTACTGGGATCATTCTTTGTTTTTTTGGTGCACTTTATGGTGGCTTTTGGAGGATCCAAATGAGAAGAAGGTTCAATCTGCCTTCTTATAACTTTTGTTTTGGCAAACCTTCAGCTTCTGATTGCACACTTTGGCTATGTTGTTGCTGGTGCTCTCTTGCTCAAGAAGTAAGGACGGCAAATAGCTATGACATTGTAGAAGACAAATTATGCAGGAAAGAAGGTTCTTATAGTAGTGACCAACAGCCAATGTCACCTTTGCCTCGTGAAGATGTGGCATCTGGCACAAGTTCTCCTTTGGGTAACAACTCTTCCCCTTCTATGATCAAGCCATCTAGTCCTCTAAGTTCAAGCAGTTTCTTGAAGGAATATCGTAGTCCAGAGAGACCACTATCTACTGTAAAAGAAGAGCCTTCTGAAAGAGGTAAAGATGATCCAATGAACCCACCTACTCCACCATTAATACAAAGGGAATCTCTTGGTCCCTGA 1680 0.4208 MVSVDNGKDEIEDSNGIKVNDFASIDISTSGRTLVGNENPQRKFQSTLSFIPNRINFLKFGSASAKFKRLATEKDQLSQAVPSPSSLRLRERFSGMFAKKLDWGSLKKMCVEWIRDPINMALFVWILCVAVSGAILFLVMTGMLNGVLPRKSQRNAWFEVNNQILNALFTLMCLYQHPKRCYHLVLLCRWSPQDISKLRKVYCKNGTYKPHEWAHMMVVIILLNLNCFAQYALCGLNWGYKRSDRPAIGVGICISFAIGAPAVAGLYAIVSPLGKDYNSEMDEEALVQDSVAPRLDQLRVKSFQKKYSFASRQQQRVIENRPPQWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFTLAAVNIENDTVRQALVATGIILCFFGALYGGFWRIQMRRRFNLPSYNFCFGKPSASDCTLWLCCCWCSLAQEVRTANSYDIVEDKLCRKEGSYSSDQQPMSPLPREDVASGTSSPLGNNSSPSMIKPSSPLSSSSFLKEYRSPERPLSTVKEEPSERGKDDPMNPPTPPLIQRESLGP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2271 559 PANTHER PLAC8 FAMILY PROTEIN-RELATED 11 556 - -
Pvu8g2271 559 PANTHER - 11 556 - -
Pvu8g2271 559 MobiDBLite consensus disorder prediction 473 559 - -
Pvu8g2271 559 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Pvu8g2271 559 MobiDBLite consensus disorder prediction 473 520 - -
Pvu8g2271 559 MobiDBLite consensus disorder prediction 525 541 - -
Pvu8g2271 559 Pfam PLAC8 family 325 455 IPR006461 -
Pvu8g2271 559 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 324 458 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2271 Pvu-Chr8 53225790 53227850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2271 - - gmx:100795088 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2561 1 50640367 50642122 Pvu8g2271 8 53225790 53227850 ECH
Pvu8g2271 8 53225790 53227850 Pvu8g2271 8 53225790 53227850 ECH
Pvu1g2561 1 50640367 50642122 Pvu8g2271 8 53225790 53227850 PCT