Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2561 ATGGTTTCGGTTGATAACGGGTTTGTGAATCCTAAAGATGAAATTGAGGAATCTAGTGGCAGTAAAGTGAAGGAGTTTGTTTCTATAGATATTTCAACAACTCAAGAAAGATTTCTGAGCAGTGAAGATTCTCAGAGAAAGCTTCAAGGCACTTTAAGTTCTTCTGCTCCTAATAGGATAAATTTTCTTAAATTTGGTTCGGCATCTGCCAAATTCAAGAGGCTTGCTACTGAGAGAGACCAGGTTTCACTATCTGTGCCTTCTCCTCGTTCAAATGGTCTAAGAGCACGGTTCAGAGGCATGCTTGCTCAGAAACTTGATGGGGGTTCGGTCAAGAAGATGTGCGTGGAGTGGATTAGAAGTCCAGTGAACATGGCCCTTTTTGTGTGGATCACATGTGTTGCTATTTCGGGTGCTATTCTATTCCTGGTCATGACAGGCATGTTGAATGGCGTGCTTCCAAGGAAGTCTCAGAGAAATGCATGGTTTGAAATAAATAACCAAATACTCAATGCATTGTTTACACTCATGTGTTTGTATCAACACCCTAAGAGGTTCTACCACCTTGTTCTTCTAATCAGATGGAGACCAAATGACATCTCTAGACTGAGAAAGTTGTACTGCAAGAATGGTACTTACAAGCCCCATGAGTGGACACATATGATGGTAGTGGTCATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTAGGGTATACAAGGTCTGAGAGACCAGCCATCGGAGTTGGAATATGTGTATCTTTTGCAATTGCTGCTCCTGCAGTTGCTGGATTGTACACCATTCTTAGTCCACTTGGGAAGGACTATGAATGTGACTCTGATGAAGAAGTGCAGGAGCAAATTACTGGCTCTCAAAGGCAAGATCAGCTGAGAGAGAAACTATGTGAGAACAAATATTCATTTGCATCCAAAGATCAAAGGGGTGTTGAAAATAGACCTAAGTGGAGTGGAGGAATACTTGACATTTGGAACGATATTTCCTTAGCATATCTCTCACTTTTCTGCACCTTCTGTGTCTTTGGGTGGAATACAGAGAGACATGGCTTTGGAAACATGTATGTCCATATTGCCACTTTTATGCTGTTTTGTATGGCACCTTTCTGGATTTTTATTTTGGCTTCTGTTAACATAGATGATGAGGATGTCAGGCAGGCTCTAGGAGCTGTTGGTATCATTCTTTGTTTTCTTAGTTTACTATATGGTGGATTTTGGAGGATCCAAATGAGAAAGAGGTTCAACTTACCTGCCTATGACTTCTGTTTTGGCAACCCTTCAGCTTCTGACTGCACACTCTGGCTATTCTGTTCCTGGTGCTCTCTTGCTCAAGAAGCAAGAACAGGAAATAACTACGATCTTGTAGTAGATAAGTTCTCTAGGAAACAAACTGATACTAGAAACCTACCTTCAGTCTCACCTTTGGCTAGGGAAGATGTAGTATCAACGAAATCTGACACAAGTTCTCTGGGTGGCAACTCTTCCCCTTATATGATGAAAACATCTAGTCCTCCAAATTCAACCAATGTCTTCAAGGGAGGTTATAGACCAGATAGTATTGTAGAAAAAGAGAATTGTGAAAGAGGTGAAGATGGAATAATGAACCCGCCGGATCCCCTATTGATCCAAAGAGAGTGA 1671 0.4123 MVSVDNGFVNPKDEIEESSGSKVKEFVSIDISTTQERFLSSEDSQRKLQGTLSSSAPNRINFLKFGSASAKFKRLATERDQVSLSVPSPRSNGLRARFRGMLAQKLDGGSVKKMCVEWIRSPVNMALFVWITCVAISGAILFLVMTGMLNGVLPRKSQRNAWFEINNQILNALFTLMCLYQHPKRFYHLVLLIRWRPNDISRLRKLYCKNGTYKPHEWTHMMVVVILLHVNCFAQYALCGLNLGYTRSERPAIGVGICVSFAIAAPAVAGLYTILSPLGKDYECDSDEEVQEQITGSQRQDQLREKLCENKYSFASKDQRGVENRPKWSGGILDIWNDISLAYLSLFCTFCVFGWNTERHGFGNMYVHIATFMLFCMAPFWIFILASVNIDDEDVRQALGAVGIILCFLSLLYGGFWRIQMRKRFNLPAYDFCFGNPSASDCTLWLFCSWCSLAQEARTGNNYDLVVDKFSRKQTDTRNLPSVSPLAREDVVSTKSDTSSLGGNSSPYMMKTSSPPNSTNVFKGGYRPDSIVEKENCERGEDGIMNPPDPLLIQRE* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2561 556 MobiDBLite consensus disorder prediction 489 524 - -
Pvu1g2561 556 Pfam Protein of unknown function (DUF2985) 117 195 IPR021369 -
Pvu1g2561 556 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 327 459 IPR006461 -
Pvu1g2561 556 MobiDBLite consensus disorder prediction 476 556 - -
Pvu1g2561 556 MobiDBLite consensus disorder prediction 528 542 - -
Pvu1g2561 556 PANTHER PLAC8 FAMILY PROTEIN-RELATED 18 556 - -
Pvu1g2561 556 PANTHER - 18 556 - -
Pvu1g2561 556 Pfam PLAC8 family 328 458 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2561 Pvu-Chr1 50640367 50642122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2561 - - gmx:100811964 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2561 1 50640367 50642122 Pvu8g2271 8 53225790 53227850 ECH
Pvu1g2561 1 50640367 50642122 Pvu1g2561 1 50640367 50642122 ECH
Pvu1g2561 1 50640367 50642122 Pvu8g2271 8 53225790 53227850 PCT