Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2265 ATGGAGGCAATTCAATCATGGGTTTCAAATCACAAGCTAGGAACACTTGGGGGACTGTGGGCCTCTGGGATTGGGGCATCACTTGTGGCTAATTCACGTACAGGGTCTCCAATGAAGCCCAGTCTTAGGCTCATCCATGCCAGATTGCATGCCCAAGCTTTAACCCTGGCAGTGTTGTCTGGTGCCGCTGCTTATAGATACTACGAGATTCGTGCATTCGGCCCAAAACCACAGGCCCACGTTCCTTCTCCCACTGTGGCCCAGCTAGCTGAATGGGAGCTTCTAACTCCTTTCTGA 297 0.5185 MEAIQSWVSNHKLGTLGGLWASGIGASLVANSRTGSPMKPSLRLIHARLHAQALTLAVLSGAAAYRYYEIRAFGPKPQAHVPSPTVAQLAEWELLTPF* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2265 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 72 IPR040153 -
Pvu8g2265 98 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Pvu8g2265 98 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Pvu8g2265 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2265 Pvu-Chr8 53152762 53153624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2265 - - lja:Lj2g3v2843610.1 144.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2265 8 53152762 53153624 Pvu8g2265 8 53152762 53153624 ECH
Pvu1g2567 1 50669907 50670920 Pvu8g2265 8 53152762 53153624 PCT