Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2567 ATGGACGCAGTTCAGTCCTGGGTTTCAGACCACAAGCTCACCACCATTGGAGCACTCTGGGCATCTGGAATTGGAGCATCACTTGTGGCTTATTCATGCAAAAAGTCCCCAATGAAGCCTAGTCTCAGGCTTATCCATGCTAGGATGCATGCTCAGGCACTAACTTTAGCAGTGTTGTCTGGTGCAGCTGCTTATCATTATTATGAGAAAGGTTCTCTTCAGCCAAAACCAGTGGCAGATAATAATATTTCTGCCACCAATTTGAACCAGATTGTTGAATATGAAATTCACTGTCCTTTCTAA 303 0.4389 MDAVQSWVSDHKLTTIGALWASGIGASLVAYSCKKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEKGSLQPKPVADNNISATNLNQIVEYEIHCPF* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2567 100 Gene3D - 13 72 - -
Pvu1g2567 100 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Pvu1g2567 100 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Pvu1g2567 100 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 77 - -
Pvu1g2567 100 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 77 IPR040153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2567 Pvu-Chr1 50669907 50670920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2567 - - gmx:100500345 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2567 1 50669907 50670920 Pvu1g2567 1 50669907 50670920 ECH
Pvu1g2567 1 50669907 50670920 Pvu8g2265 8 53152762 53153624 PCT