Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2260 ATGACCGAGACCCCGAAAATTTCAGCAGTCGGTTTGCCGGCGACGCCGAGGGTGAAATCCGAGCCTGGTGTTGTACCAGGGTCAGGTCAGAACCCGGGGATTATAAGGTTTGGTTTGAGAGCTGAAATTGATACTTCGCCGCCGTTCGGGTCTGTCAAGGAAGCGGTGACCCGTTTCGAAGGAACTGGACCTTGGACACCCTTTTACAAATTCGGAGAGAACAGTGCTGAAGAATTTGACATAAAGAGAGTGGAGGAAGAAGCCGCAAAGTTAGAAAAGGATTTGATAGTGAAAGAACTCGAGACACTTGATGTGCTTGAAGAACTGGGAGCAACCAAAGCAATTTTGGAGGAATTAAAGCTGCAGCTACAATCAGAAGCATTGAATTGCTTAGCAACTCGAGGTGAAAATTCATGTGAACAGGTTGGAGCTGCTGTTAGAAATTGTGTGAATGGTATCAACAATGAAGAGCAGACATTGCAAAGTTCGAGTCCGTGTGCACCTGATCTGTTCTTAGTGGAGTTAAGACAAGCTAAACTGAGCCTTGGTAAAACGATTAATGATCTTGAAGTGATACAATCTTCTGTTGAAGATTTAAATAAGAAGATGAAGAAGGAAAGGCTTTTTGTTGAGAGGACACGGGAGAAACTAGCGTCGAAGTTTACAGCTGTCTCTACTCAAGAAGTTACCAAAACAGAAGCAGGGTTTAATCCTCCTGAAGCTACTGCTGGAACAGGTTGCACTTGTCATCATCCCCTAAATGGTGGGAGGAGTTTCGAATTTGATACTGGACAGTGCAATGGAATGAGTGAAACAAGAAGCTCTGAAGTTTTAAGGCCCTTGGCTGAGTTTGGAGACAATGGATTTAATATTAAGACTGCTGAGATGAGGTGGTTTGCAGCGAAAAAAATGGAAGAAGCTGCAATAGCAGCAGAAGCCGTTGCTCTTGCTGAAATTGAGGCTCTATGTTGCCCTGAAATATCATCTGAATTTTCGCTTCCAGAACATCAGAAAGTGGACTTTTCCTTAGGGGAGTACTCTCCTCTAAATCCCGTAGTTCAATTTCCTCAAGAGTCAACCTTGAAGAAGGTAACAGTTTCCAAGTTTCCAATTGACAAAATAGGTATTTTGAAAAAGTTTGAGGAAGCAACAGAAGAAGTTCTACGCAGCAAACAAGTCTTGACTGAGGCATTAAATAGTGTTGAAAGTGCAAATATAAAGCAGCTTGCTGCTGAAGAGGCTCTTCGGAGATGGATTCCTGAGAATGATCTAAAAGGACAGCCATTGATTAAGAGCAGGACGTTCAATCAAGCTGGAATTTGTCAAGATTCTACTCTACCAGATGTAATCCGATCAATTACTACAACTAGCAATGATCCGAAGCATGCCTTGAGGTCTTCAGTTTCAATGAGAGATGTACTTAGCGAAAAGCAAGTTCTTGAAGATTACACTACAACAAAGGATAAGCAAGAGCATTCTGAAAAGACGGTAGCATTGAGTCAAATGCTTCGAGCATTGAAGGAGGATCAAACTCTACCTACAATACCCGAGAAAGATGGGAAGAGTAATCAAAAGCAAAAGCAGTTCATAGCGTCTAGGAAAAAGTTCAGTTTCATTCAAATATCACTCCCCTTGGGAAAGCGAAGTAAGAAGAAGACATGA 1662 0.4236 MTETPKISAVGLPATPRVKSEPGVVPGSGQNPGIIRFGLRAEIDTSPPFGSVKEAVTRFEGTGPWTPFYKFGENSAEEFDIKRVEEEAAKLEKDLIVKELETLDVLEELGATKAILEELKLQLQSEALNCLATRGENSCEQVGAAVRNCVNGINNEEQTLQSSSPCAPDLFLVELRQAKLSLGKTINDLEVIQSSVEDLNKKMKKERLFVERTREKLASKFTAVSTQEVTKTEAGFNPPEATAGTGCTCHHPLNGGRSFEFDTGQCNGMSETRSSEVLRPLAEFGDNGFNIKTAEMRWFAAKKMEEAAIAAEAVALAEIEALCCPEISSEFSLPEHQKVDFSLGEYSPLNPVVQFPQESTLKKVTVSKFPIDKIGILKKFEEATEEVLRSKQVLTEALNSVESANIKQLAAEEALRRWIPENDLKGQPLIKSRTFNQAGICQDSTLPDVIRSITTTSNDPKHALRSSVSMRDVLSEKQVLEDYTTTKDKQEHSEKTVALSQMLRALKEDQTLPTIPEKDGKSNQKQKQFIASRKKFSFIQISLPLGKRSKKKT* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2260 553 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 7 552 - -
Pvu8g2260 553 Pfam Weak chloroplast movement under blue light 173 422 IPR008545 -
Pvu8g2260 553 Pfam Weak chloroplast movement under blue light 41 232 IPR008545 -
Pvu8g2260 553 Coils Coil 74 101 - -
Pvu8g2260 553 Coils Coil 106 126 - -
Pvu8g2260 553 MobiDBLite consensus disorder prediction 1 26 - -
Pvu8g2260 553 PANTHER WEB FAMILY PLANT PROTEIN 7 552 - -
Pvu8g2260 553 MobiDBLite consensus disorder prediction 508 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2260 Pvu-Chr8 53093056 53095727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2260 - - gmx:100781281 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2573 1 50710646 50713855 Pvu8g2260 8 53093056 53095727 ECH
Pvu8g2260 8 53093056 53095727 Pvu8g2260 8 53093056 53095727 ECH
Pvu1g2573 1 50710646 50713855 Pvu8g2260 8 53093056 53095727 PCT