Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2573 ATGGCAGAAACTCGAGACGCCGCCGCCGCCTATGGGGTGCCCGGAACGCCCGCCATAAGGGAAGTTAGACCCGACACGGGGAACCATGGCGGAAACGGGTCGGGCGGAATTCGGAGAGTGAATTTCCGAGCGGAGATTGACACGTCACCGCCGTTTGGGTCGGTTAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGCCCTGGATACCGTTTTTTAACAGCATTGAAGATTTTGACATAAAGAAAGTGGAGGAACAGGCAGCAGAGTTGGAAAAGGATTTGATTGTCAAAGAACTTGAAACTCTTGATGTGCTTGAGGAACTGGGAGCTACCAAGAGGATTGTGGAGGACTTGAAGCAGCAATTACAAAAAGAGGCTATGAAATGTTTTGAATCCCGAGATGTAAATTCATATGAACAAGTTGGAACTCCTGTTTTTAAGGAGATGAATAAGGAGAATTGTGGAAACAATGTCAATGATGAAGAACAGATGATGAAAATTCCAAGCCCGTGCTCTATCATGTCATCATCACCTGATATGATCTTAATGGAGTTGAAGCAAGCCAAGTTGAATTTAGGCAAAACTATAAATGAACTTGGAGTGATACAGTCCTCCGTTGAGTCTTTGAATAAGAAGATGAAGAAGGAGAAAGTTTTTCTGGAGAGGACACGTGAAAAACTAGCATCAAAGTTTGCAGCAGTAACTGCTCTGGAGAGGGTCCAAGAGCAGACAAGATCAAATCCACCAGCATCTCATGTAGAATGTGCCTTTGGTAACCCTGCTAGTACTATGAGAAATTTCAATTCTGATTCCGGGCAGTGCAATAGAATGGTTGAGACTAGAAGATCTGAACCTTCAAAGCCCTTAAGTGTGTATGAAGAATATGGATTCAGTGTTAAGACTGCTGAGATGAGGTGGCTCGCTGCTAAAAAGATGGAAGAAGCTGCAAGAGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTAATGGTGAGAGATCTTCAGGATTTGTTCTGCCAGAACCTGAGAAATTCACTTTCGCTTTTGGAGATCGCTCTCCCCTAAACTCCAAGGCTCAGATACCTGAGGAGTCAACCTTGAAGAAGGTAATAGATGCCAAGTTTCAAATTAATGAAACAAAAATTTCTAAACTGACTATTTTGAAGAAGTTGGAGGAAGCATCAGAGGAAGTTCTACACAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAACTGCAAACAAAAAGCAACATGCTGCTGAGGAGGCTCTGAGGAGATGGATTCCAGAGGATGACCTCAGAAGGTATAACACTATCAACTGTAACAAGCTTAATCAAGGTGGAATCTGTCAAGATTCTCTGCATGATGTAACCAAGTCAACAGCAGCAAACAATGATCCAAAGCCAACATTAAGACCCACAATTTCTATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACTGAAAGACAAAAGGTAGCATTGAGTCAAATGCTTCAAGCATTGAGGGAAGATCTAACTCTTCCAACAAAGACTGAGAAAGATGGGAGTAATCAGAAGCAGTTCATGCCACAGAGGAAGAAATTTGGATTCATTCAAATATCACTCCCCCCCTTGACAAAATCAAACAAGAAAAGGTCATGA 1692 0.4303 MAETRDAAAAYGVPGTPAIREVRPDTGNHGGNGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFNSIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCFESRDVNSYEQVGTPVFKEMNKENCGNNVNDEEQMMKIPSPCSIMSSSPDMILMELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKVFLERTREKLASKFAAVTALERVQEQTRSNPPASHVECAFGNPASTMRNFNSDSGQCNRMVETRRSEPSKPLSVYEEYGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSNGERSSGFVLPEPEKFTFAFGDRSPLNSKAQIPEESTLKKVIDAKFQINETKISKLTILKKLEEASEEVLHSKQVLTDALNRVETANKKQHAAEEALRRWIPEDDLRRYNTINCNKLNQGGICQDSLHDVTKSTAANNDPKPTLRPTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLQALREDLTLPTKTEKDGSNQKQFMPQRKKFGFIQISLPPLTKSNKKRS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2573 563 Coils Coil 210 230 - -
Pvu1g2573 563 PANTHER WEB FAMILY PLANT PROTEIN 2 562 - -
Pvu1g2573 563 Coils Coil 407 427 - -
Pvu1g2573 563 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 2 562 - -
Pvu1g2573 563 Coils Coil 80 100 - -
Pvu1g2573 563 MobiDBLite consensus disorder prediction 17 38 - -
Pvu1g2573 563 MobiDBLite consensus disorder prediction 523 544 - -
Pvu1g2573 563 Pfam Weak chloroplast movement under blue light 181 435 IPR008545 -
Pvu1g2573 563 Pfam Weak chloroplast movement under blue light 44 127 IPR008545 -
Pvu1g2573 563 Coils Coil 105 125 - -
Pvu1g2573 563 Coils Coil 501 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2573 Pvu-Chr1 50710646 50713855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2573 - - gmx:100776514 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2573 1 50710646 50713855 Pvu8g2260 8 53093056 53095727 ECH
Pvu1g2573 1 50710646 50713855 Pvu1g2573 1 50710646 50713855 ECH
Pvu1g2573 1 50710646 50713855 Pvu8g2260 8 53093056 53095727 PCT