Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1994 ATGGCTGCCTCAGTCTCCACTGTTGGAGCTGTCAACGGAGCTCCACTGAGCTTGAACAGCTCTGGAGCTGGAGCTTCAGTTCCCAGTTCAGCCTTTTTTGGCAGCAGTTTGAAGAAGGTTACTGTCTCAAGGGTCCCTAACACTAAAATTTCCTCTCGAAGTTTCAAAATTGTTGCTGCAAAAGAGATTGATGAGAACCTGCAGACAGATAAGGACAGATGGAGAGGTCTTGCCACCGATATTTCAGATGACCAGCAAGACATCACAAGGGGGAAGGGTATGGTTGATCCCCTTTTCCAAGCTCCAATGAATACTGGAACTCACAATGCAATCATGAGCTCTTATGAGTACATTAGCACTGGACTTAAACAGTACGACTTGGATAACGACGTGGATGGTCTTTACATAGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATTACCAAGAATTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGGTCAAGGAAAATCCTTCCAATGCGAGCTTGTCTTTGCCAAGATGGGAATCAACCCTATCATGATGAGTGCTGGAGAGTTGGAGAGTGGAAATGCAGGAGAGCCAGCAAAGTTGATCAGGCAAAGGTACCGTGAAGCTTCTGATATAATAAGGAAGGGGAAGATGTGCTGTCTCTTCATCAACGATCTTGACGCAGGAGCTGGTCGACTTGGTGGAACCACTCAGTACACTGTGAACAACCAGATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCCACAAATGTTCAGCTCCCTGGTATGTACAACAAGGAAGACAATGCCCGTGTGCCAATCATTGTCACCGGTAACGATTTCTCAACACTGTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCACCTACCAGGGAAGACCGAATTGGTGTCTGCAAGGGAATTTTCCGCACTGACGATGTTCCTCAGGAGGACATTGTCAAGCTTGTTGACAACTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTCAGGGCTAGAGTATATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGATTTGATTGGGAAGAGGCTTGTGAACTCAAAGGAAGGACCTCCAACCTTTGATCAGCCCAAGATGACTTTGAATAAGCTCTTAGAGTATGGTAACATGCTTGTCCAAGAACAGGAGAATGTGAAGAGAGTCCAACTGGCAGACAAGTACTTGAACGAGGCTGCCCTTGGTGATGCTAATCAAGATTCCATTAACAGAGGAACTTTCTATGGCAAAGCGGCTCAGCAAGTAAATGTTCCCGTTCCTGAAGGTTGTACTGATCCAAATGCCTCAAACTTCGACCCAACTGCAAGAAGTGATGATGGAACCTGCTTATACACCCCCTGA 1434 0.4644 MAASVSTVGAVNGAPLSLNSSGAGASVPSSAFFGSSLKKVTVSRVPNTKISSRSFKIVAAKEIDENLQTDKDRWRGLATDISDDQQDITRGKGMVDPLFQAPMNTGTHNAIMSSYEYISTGLKQYDLDNDVDGLYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDDVPQEDIVKLVDNFPGQSIDFFGALRARVYDDEVRKWISGVGVDLIGKRLVNSKEGPPTFDQPKMTLNKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANQDSINRGTFYGKAAQQVNVPVPEGCTDPNASNFDPTARSDDGTCLYTP* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1994 477 Gene3D - 126 310 IPR027417 -
Pvu8g1994 477 Pfam ATPase family associated with various cellular activities (AAA) 166 307 IPR003959 GO:0005524|GO:0016887
Pvu8g1994 477 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 476 - -
Pvu8g1994 477 PANTHER - 1 476 IPR044960 -
Pvu8g1994 477 MobiDBLite consensus disorder prediction 455 477 - -
Pvu8g1994 477 Gene3D - 311 423 - -
Pvu8g1994 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 336 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1994 Pvu-Chr8 49874653 49878008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1994 - - gmx:100806240 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2421 1 49528436 49531638 Pvu8g1994 8 49874653 49878008 ECH
Pvu8g1994 8 49874653 49878008 Pvu8g1994 8 49874653 49878008 ECH