Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2421 ATGGCTGCCTCCCTCTCCACTGTCGGCGCTGTCAACAGAACCCTTTTGAATCTGAATGGATCTGGAGGCGGAGCTTCAGGTCCCAGTTCAGCTTTCTTTGGCACAAGCTTGAAGAAGGTTATTAGCTCAAGGGTCCCTAACAGCAAGTTGACATCTGGAAGCTTCAAAATTGTTGCTGCAGACAAAGAGATCGAGGAGACCCAGCAGACCGAGGGGGACAGATGGAGGGGTCTAGCCTACGATGTTTCTGATGACCAACAAGACATCACAAGAGGGAAGGGTTTGGTTGATTCTCTTTTCCAAGCTCCAATGGATGCTGGAACTCACTATGCAGTCATGAGCTCCCACGAGTACCTCAGCGCTGGACTACGCCAGTACGACTTTGACAACATGAAGGATGGTTTCTACATTGCTCCAGCTTTTTTGGACAAGCTTGTTGTTCACATCGCCAAGAACTTCATGACCTTGCCCAACATCAAGGTTCCTCTCATTCTTGGTGTCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCCGGAGAGCCAGCAAAATTGATTAGGCAGAGATACCGTGAAGCCTCAGACTTAATCAAGAAGGGAAAGATGTGTGTTCTGTTCATCAATGATCTTGATGCAGGAGCAGGTCGTCTTGGTGGAACCACCCAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCCACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGATAACGCCCGTGTGCCCATCATTGTCACTGGTAACGATTTCTCAACACTTTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGAAGACCGCATTGGTGTTTGCAAGGGAATTTTCCGGACCGATGGTGTTCCTGAAAAGGACATTGTCGAGCTTGTTGACAAACACCCTGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTGTATGATGATGAAGTAAGGAAGTGGATTTCTGGTGTTGGTGTTGATTCTGTTGGGAAGAAGCTTGTGAACTCAAAGGAAGGACCTCCTACCTTTGACCAGCCCAAGATGACTCTGGACAAGCTCTTGCTGTATGCTAGCATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTCCAATTGGCTGACCAGTACTTGAATGAGGCTGCTCTTGGAAATGCCAACGAGGATGCTATCAAGAGTGGATCTTTCTTCAAATAG 1326 0.4766 MAASLSTVGAVNRTLLNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVMSSHEYLSAGLRQYDFDNMKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFFK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2421 441 Gene3D - 127 311 IPR027417 -
Pvu1g2421 441 Gene3D - 312 424 - -
Pvu1g2421 441 Pfam ATPase family associated with various cellular activities (AAA) 167 308 IPR003959 GO:0005524|GO:0016887
Pvu1g2421 441 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 440 - -
Pvu1g2421 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 343 IPR027417 -
Pvu1g2421 441 PANTHER - 1 440 IPR044960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2421 Pvu-Chr1 49528436 49531638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2421 - - gmx:100797222 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2421 1 49528436 49531638 Pvu8g1994 8 49874653 49878008 ECH
Pvu1g2421 1 49528436 49531638 Pvu1g2421 1 49528436 49531638 ECH