Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1484 ATGTTCAACTATCAAACAATGAACAAGAGCGTGCCATCTCAATACAGAGGTACAGGTCGCGGGGGTCGTAGACCATTTAGAGGCTATGGTCGTGACCGATTCAATCACCATCGTGGTAGGGGACGTGGTAGGGGACGTGGCAGGGGTCATGGTAGCCAGATCTCATCTCATTCTTCTGAAGCCACAATTGCTAATGTTGCAGATGTGCCTGCTGCTGATGGGTGCACTTCAGTGATGCAACCATCATCAGTCTGTGTGCAATCATCATTACCAAATCCCACACAAGTTCCATCCGCACTGTTGCAAGCACAACAACGTAAGTTATGGTGTGAAATTTGTATAGCCGAGTGCAATACTCCCGAAATGTTGGAGCAACACAAAAATGGAAAGCGGCATAGGAAGAACTTGATTGTACATGAAGAACTACAAAGACTCAAAGCTCTAAATGGACAACAGAGTGGAAATATTTCTACTTCTGAATCAAATTTAACAATCCAACATGAGAAAGCTCAAGAATCTGAGATAAAAGGATTACCTTTCGAAGTTGCTGGTTCTGAAGCTACAATTGATAACCACAATGATGAAACAGAGGTTCAGAATAATGTAGAAGGGGTTTCCGAAGTTCAAAATGAAGAGCCTCAAGAGGAACCTAGAGAAAACTCTTTCATACAAGGATGTGGATTCAAGCGTACGATGAGCCTAGGTAGAGGAGGTAAATACATGCGGAGTGATGATGGGTCAAGAAAACTGGTGGAACCTCCAAAGTCTAAGCATAAGCAGGTTACATCTCTTATATGCGAGTTGTGCAATGTTAAATGTGATTCCCTAATTGTCTACAATAGTCACTTGACGGGGAAAAAGCACATGTCAAATTTCAAGCGTGTCCATGGCTACCAGCCTTTGAATGGAGAAGCAGGGAGCAAACCGCTTCACTCTCCTGGTATTAATTCTCTGCCAAATGCAAATAATTTTCCGGTCTCACAAGGTGCAAGTGTCCCACTAGGCATTAGTGATCCACGGAACCTTCTGGCTCATCTCCTTGTGACTGTGCTATCCAATGTCCAAGTACCATCAACAGCACCACTGTCAGGTCCTGTGGCTGATCAGATACAAGCACCAACATTCATGGCAGGATCAAGTCATCAACCAACATCTCAAAATTTGACAGAGACTCTAGTGTCAGAGTCCATGGCATATTCTGAGATTGAAAATCATGCTGGGAAAACAAAAGATCAGATGCCATCTGTCATATTGCAGCTGGATGAGACTGCAGGTTCATGTAGTAATGCCAATACTGAAACTGTTGGTGGAAGTTCTGCAAAGGAAGAAACGGTGGTGAAACTTCCCCAGGATAGTGCAGTTATAACACCTGCAGAAAACCCAGTTGCAACAAATAAACAAATACCTTCGTAA 1413 0.4345 MFNYQTMNKSVPSQYRGTGRGGRRPFRGYGRDRFNHHRGRGRGRGRGRGHGSQISSHSSEATIANVADVPAADGCTSVMQPSSVCVQSSLPNPTQVPSALLQAQQRKLWCEICIAECNTPEMLEQHKNGKRHRKNLIVHEELQRLKALNGQQSGNISTSESNLTIQHEKAQESEIKGLPFEVAGSEATIDNHNDETEVQNNVEGVSEVQNEEPQEEPRENSFIQGCGFKRTMSLGRGGKYMRSDDGSRKLVEPPKSKHKQVTSLICELCNVKCDSLIVYNSHLTGKKHMSNFKRVHGYQPLNGEAGSKPLHSPGINSLPNANNFPVSQGASVPLGISDPRNLLAHLLVTVLSNVQVPSTAPLSGPVADQIQAPTFMAGSSHQPTSQNLTETLVSESMAYSEIENHAGKTKDQMPSVILQLDETAGSCSNANTETVGGSSAKEETVVKLPQDSAVITPAENPVATNKQIPS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1484 470 Gene3D Classic Zinc Finger 94 139 - -
Pvu8g1484 470 Gene3D Classic Zinc Finger 247 294 - -
Pvu8g1484 470 MobiDBLite consensus disorder prediction 1 15 - -
Pvu8g1484 470 MobiDBLite consensus disorder prediction 204 255 - -
Pvu8g1484 470 Pfam Zinc-finger of C2H2 type 109 132 - -
Pvu8g1484 470 Pfam Zinc-finger of C2H2 type 265 288 - -
Pvu8g1484 470 PANTHER OS06G0651300 PROTEIN-RELATED 7 441 - -
Pvu8g1484 470 MobiDBLite consensus disorder prediction 30 47 - -
Pvu8g1484 470 SUPERFAMILY beta-beta-alpha zinc fingers 254 295 IPR036236 -
Pvu8g1484 470 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 7 441 - -
Pvu8g1484 470 SMART ZnF_U1_5 105 139 IPR003604 GO:0003676|GO:0008270
Pvu8g1484 470 SMART ZnF_U1_5 261 295 IPR003604 GO:0003676|GO:0008270
Pvu8g1484 470 MobiDBLite consensus disorder prediction 1 60 - -
Pvu8g1484 470 SUPERFAMILY beta-beta-alpha zinc fingers 95 137 IPR036236 -
Pvu8g1484 470 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1484 Pvu-Chr8 26198259 26205112 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1484 - - vra:106780287 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1484 8 26198259 26205112 Pvu8g1484 8 26198259 26205112 ECH
Pvu8g1484 8 26198259 26205112 Pvu10g0742 10 19186067 19191348 PCT